GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:50:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

PEG001-C-004522-301 Non-Normalized Pedal-Pleural Ganglia Aplysia californica cDNA clone PEG001-C-004522 3', mRNA sequence.
EB196666.1:793-812
CCTTTCTTTAAAGTAGGTGCTTTTAACAAC793CCCCCATCAAACACAAATTCAGGTTCATTCCAGGAGGCAGGCCTCCAAAC
Tridacna gigas genome assembly, chromosome: 9.
OX244036.2:9541404-9541423
ATTTTCTCCTTTTCCTACTATGTTTTCTAC9541404CCCCCATCAAACACAAATTCCATCATTTAAGCCACATTTAAATTGTCGTC
Tridacna gigas genome assembly, chromosome: 14.
OX244041.2:27017153-27017172
ACATTTCCTCCTTTCCCTCAATGTTTTCTA27017153CCCCCATCAAACACAAATTCTATCATTAGAACCACATTTAAATTTTTGTC
Oxytorus armatus genome assembly, chromosome: 12.
OY253755.1:1456356-1456375
CACCGATAACAATCTCCGCTATCGGAACCT1456356CCCCCATCAAACACAAATTCGTGTCGCCGTATAATAACGAGACCAGTAAT
Xanthia icteritia genome assembly, chromosome: 8.
OX421938.2:19378918-19378937
ATCTGGAATTTCGTAACAACAACCCGTCTG19378918GAATTTGTGTTTGATGGGGGCAATAGGGTCACCCCCTATTACTACTACTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCCCATCAAACACAAATTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCCATCAAACACAAATTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.137 | 0.128 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCCATCAAACACAAATTC&k=0&no_gap=0&offset=0&limit=50
0.154 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=GAATTTGTGTTTGATGGGGG&k=0&no_gap=0&offset=0&limit=46
0.155 | 0.001 | cgi_end;

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