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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 11:09:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:241098435-241098454
GTTGGATTTGGCGGATATATGGCGGATCCG241098435CCCCCATTACCTGACTGCAAAACCAATCGCCAGCCTTGCTTTTCTTCGCA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:245567834-245567853
GTTGGATTTGGCGGATATATGGCGGATCCG245567834CCCCCATTACCTGACTGCAAAACCAATCGCCAGCCTTGCTTTTCTTCGCA
KS01062G11 KS01 Capsicum annuum cDNA, mRNA sequence.
BM064075.1:156-175
TGCGAAGAAAAGCAAGGCTGGCGATTGGTT156TTGCAGTCAGGTAATGGGGGCGGATCCGCCATATATCCGCCAAATCCAAC
BJ02039B09 BJ02 Capsicum annuum cDNA 5', mRNA sequence.
CO909036.1:132-151
TGCGAAGAAAAGCAAGGCTGGCGATTGGTT132TTGCAGTCAGGTAATGGGGGCGGATCCGCCATATATCCGCCAAATCCAAC
KS13031F06 KS13 Capsicum annuum cDNA, mRNA sequence.
GD054520.1:127-146
TGCGAAGAAAAGCAAGGCTGGCGATTGGTT127TTGCAGTCAGGTAATGGGGGCGGATCCGCCATATATCCGCCAAATCCAAC
KS13066H11 KS13 Capsicum annuum cDNA, mRNA sequence.
GD056946.1:127-146
TGCGAAGAAAAGCAAGGCTGGCGATTGGTT127TTGCAGTCAGGTAATGGGGGCGGATCCGCCATATATCCGCCAAATCCAAC
KS15056A05 KS15 Capsicum annuum cDNA, mRNA sequence.
GD068623.1:131-150
TGCGAAGAAAAGCAAGGCTGGCGATTGGTT131TTGCAGTCAGGTAATGGGGGCGGATCCGCCATATATCCGCCAAATCCAAC
TSA: Capsicum annuum MGMT_Contig16147, mRNA sequence.
JW066391.1:4329-4348
TGCGAAGAAAAGCAAGGCTGGCGATTGGTT4329TTGCAGTCAGGTAATGGGGGCGGATCCGCCATATATCCGCCAAATCCAAC
Capsicum annuum clone BAC CaCM421A08 genomic sequence.
GU108230.1:21288-21307
TGCGAAGAAAAGCAAGGCTGGCGATTGGTT21288TTGCAGTCAGGTAATGGGGGCGGATCCGCCATATATCCGCCAAATCCAAC
Aphidecta obliterata genome assembly, chromosome: 2.
OZ014428.1:40087495-40087514
AAACATGACCAAAATCAGCCGAACGCTCGG40087495TTGCAGTCAGGTAATGGGGGTATAAATGTAAATATTCGCGCCCAGCCTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCCCATTACCTGACTGCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCCATTACCTGACTGCAA | format : html | download : | debug : 

0.010 | 0.010 | search_start;
0.098 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCCATTACCTGACTGCAA&k=0&no_gap=0&offset=0&limit=50
0.525 | 0.427 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCAGTCAGGTAATGGGGG&k=0&no_gap=0&offset=0&limit=48
0.530 | 0.006 | cgi_end;

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