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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:25:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus chromosome 17 clone GS-384N12, complete sequence.
AC087217.1:62239-62258
TGTATCCTTATCCAGCTCAGGTCTCCACAG62239CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mouse DNA sequence from clone RP23-331E12 on chromosome 17.
CR974466.14:67200-67219
TGTATCCTTATCCAGCTCAGGTCTCCACAG67200CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mouse DNA sequence from clone CH29-488C17 on chromosome 17.
CU407309.9:122075-122094
TGTATCCTTATCCAGCTCAGGTCTCCACAG122075CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mouse DNA sequence from clone DN-88D14 on chromosome 17.
CU464136.6:106386-106405
TGTATCCTTATCCAGCTCAGGTCTCCACAG106386CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Acomys russatus genome assembly, chromosome: 4.
LR877215.1:42620619-42620638
AGCCCCACCCTCATGACCCTACCCCCACAC42620619CCCCCTCTTTTTCTCTTCCAGGTCGTACCAACCCTCCCTGGCACCTCAAT
Mus musculus genome assembly, chromosome: 17.
OW971559.1:31082587-31082606
TGTATCCTTATCCAGCTCAGGTCTCCACAG31082587CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mus musculus genome assembly, chromosome: 17.
OW971590.1:30876439-30876458
TGTACCCTTATCCAGCTCAGGTCTCCACTG30876439CCCCCTCTTTTTCTCTTCCATACCCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OW971611.1:31168238-31168257
TGTACCCTTATCCAGCTCAGGTCTCCACTG31168238CCCCCTCTTTTTCTCTTCCATACCCACTACCCACCCCCAATAAATCTCCC
Mus musculus domesticus genome assembly, chromosome: 17.
OW971633.1:31721434-31721453
TGTATCCTTATCCAGCTCAGGTCTCCACAG31721434CCCCCTCTTTTTCTCTTCCATACGCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OW971653.1:31677111-31677130
TGTATCCTTATCCAGCTCAGGTCTCCACAG31677111CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mus spretus genome assembly, chromosome: 17.
OW971695.1:31835875-31835894
TGTATCCTTATCCAGCTCAGGTCTCCACAG31835875CCCCCTCTTTTTCTCTTCCATACGCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OW971707.1:31412611-31412630
TGTACCCTTATCCAGCTCAGGTCTCCACAG31412611CCCCCTCTTTTTCTCTTCCATACGCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OW971737.1:31242347-31242366
TGTATCCTTATCCAGCTCAGGTCTCCACAG31242347CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mus musculus genome assembly, chromosome: 17.
OW971758.1:32307291-32307310
TGTATCCTTATCCAGCTCAGGTCTCCACAG32307291CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mus musculus musculus genome assembly, chromosome: 17.
OW971779.1:30694094-30694113
TGTACCCTTATCCAGCTCAGGTCTCCACTG30694094CCCCCTCTTTTTCTCTTCCATACCCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OW971800.1:31001145-31001164
TGTATCCTTATCCAGCTCAGGTCTCCACAG31001145CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mus musculus genome assembly, chromosome: 17.
OW971821.1:33696313-33696332
TGTATCCTTATCCAGCTCAGGTCTCCACAG33696313CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mus musculus genome assembly, chromosome: 17.
OW971852.1:31054348-31054367
TGTACCCTTATCCAGCTCAGGTCTCCACTG31054348CCCCCTCTTTTTCTCTTCCATACCCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OX389811.1:36734121-36734140
TGTACCCTTATCCAGCTCAGGTCTCCACTG36734121CCCCCTCTTTTTCTCTTCCATACCCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OX389811.1:36790120-36790139
TGTATCCTTATCCAGCTCAGGTCTCCACAG36790120CCCCCTCTTTTTCTCTTCCATACGCACTACCCACCCCCAATAAATCTCCC
Mus musculus genome assembly, chromosome: 17.
OX390160.1:34640575-34640594
TGTATCCTTATCCAGCTCAGGTCTCCACAG34640575CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Mus musculus genome assembly, chromosome: 17.
OX439030.1:37653898-37653917
TGTATCCTTATCCAGCTCAGGTCTCCACAG37653898CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Somateria mollissima genome assembly, chromosome: 15.
OX598317.1:7040192-7040211
CTCCTGTCTGTATCTTCTGAGTGGCTTCTA7040192CCCCCTCTTTTTCTCTTCCACCACCACTGTTTTGATCACCTTTCTCTCCA
Fringilla coelebs genome assembly, chromosome: 2.
OY740725.1:8974189-8974208
CTATTGGTGGGGCTTTTTTTCCTTTTATTT8974189CCCCCTCTTTTTCTCTTCCAGGGACTTTTTTCATAGCTTAAATGTTTGGT
Anas acuta genome assembly, chromosome: 17.
OZ009980.1:6763891-6763910
CTCCTGTCTGTATCTTCTGAGTGGCTTCTA6763891CCCCCTCTTTTTCTCTTCCACCACCACTGTTTTGATCACCTTTCTCTCCA
UCRPT01_0012J03_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0012J03, mRNA sequence.
CV709245.1:48-67
GTTCGTTTTCTCATTAAAAATCTGAATCTC48CCCCCTCTTTTTCTCTTCCAAACTCAACGCTAGCCGAAGTCTCTCTCTCT
IC0AAA59BG05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY283416.1:29-48
CGTTTTCTCATTAAAAATCCTGAATCTC29CCCCCTCTTTTTCTCTTCCAAACTCAACGCTAGCCGAAGTCTCTCTCTCT
IC0AAA59BG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA59BG05, mRNA sequence.
FC902094.1:29-48
CGTTTTCTCATTAAAAATCCTGAATCTC29CCCCCTCTTTTTCTCTTCCAAACTCAACGCTAGCCGAAGTCTCTCTCTCT
Mouse DNA sequence *** SEQUENCING IN PROGRESS *** from clone RP23-152G18.
CT868730.5:218814-218833
TGTATCCTTATCCAGCTCAGGTCTCCACAG218814CCCCCTCTTTTTCTCTTCCATACTCACTACCCACCCACAATAAATCTCTC
Quercus robur genome assembly, chromosome: 4.
OW028768.1:60783654-60783673
AGCTCCTGAACACCAACACCCCCCCCCCCC60783654CCCCCTCTTTTTCTCTTCCATCACTGCCATATTTGGTAGCTATTATAGTT
Sambucus nigra genome assembly, chromosome: 18.
OX422224.1:204458414-204458433
ACACTGAAAACTTCCATTAGGTCTCCCCCC204458414CCCCCTCTTTTTCTCTTCCATTATTTTTCTCCTGCATTATGCTATTTTCA
Citrus sinensis genome assembly, chromosome: 4.
OY754321.1:23389390-23389409
TCGTTTTCTCATTAAAAATCTCTGAATCTC23389390CCCCCTCTTTTTCTCTTCCAAACTCAACGCTAGCCGAAGTCTCTCTCTCT
Viola odorata genome assembly, chromosome: 4.
OY829540.1:54993556-54993575
GGTAAGCTAAAGCATATACCTTTCCTTCCC54993556CCCCCTCTTTTTCTCTTCCATATTTGGTTTAGATTGCCATGCAATGTCAA
Cephonodes hylas Chylas_Sample_A1 DNA, chromosome 7, draft genome sequence.
AP025367.1:6336509-6336528
TACCAGTTTTCAATCAAAGAGGACTATTTC6336509CCCCCTCTTTTTCTCTTCCACCCCTTAATTCATTATTAGAAGCCGACAAA
Dolomedes plantarius genome assembly, chromosome: 2.
OU015491.1:135064920-135064939
GAAAATTGCATTCTGAAGAGAAAACTCCCC135064920CCCCCTCTTTTTCTCTTCCAATCTGATTGAAGTATTAAGGTTTGGCAGCA
Synanthedon formicaeformis genome assembly, chromosome: 23.
OX243976.1:2287224-2287243
CTAATAATAAATTTTGAATAGTTAACTTGA2287224CCCCCTCTTTTTCTCTTCCATTCTTCTGAAGAAGCCGTACTTTTTTAAAC
Porites lutea genome assembly, chromosome: 11.
OY283134.1:3106559-3106578
TGTGTTAGCTAGCCTGTGTCTCTCCCCAAT3106559CCCCCTCTTTTTCTCTTCCACCCTGTCCCCTACCGATTTCGACGCCTGCT
Mouse DNA sequence from clone RP24-273L24 on chromosome 17.
CU302430.14:36902-36921
GAGAGATTTATTGTGGGTGGGTAGTGAGTA36902TGGAAGAGAAAAAGAGGGGGCTGTGGAGACCTGAGCTGGATAAGGATACA
Eptesicus nilssonii genome assembly, chromosome: 3.
OX621282.1:63194804-63194823
AAGAAAGTCACAATTTTCTTGTGGAGGAGG63194804TGGAAGAGAAAAAGAGGGGGCACTAAGAAAGTAATTTGTGACCTATTTTC
Scyliorhinus canicula genome assembly, chromosome: 6.
LR744035.1:14265328-14265347
TAAAATTCAAGGAAAGCCACAAGCTTCAAC14265328TGGAAGAGAAAAAGAGGGGGCAGAAAGAAAAAGCAATCAGGGAGCAAAAC
Symphodus melops genome assembly, chromosome: 10.
OX393534.1:9257804-9257823
CACGCACAGGTGGCAAAATGGCTAATCTAT9257804TGGAAGAGAAAAAGAGGGGGGGAAATAATCAGTTCCTTCAATTCTAAAGG
Symphodus melops genome assembly, chromosome: 10.
OX393534.1:9270264-9270283
CACGCACAGGTGGCAAAATGGCTAATCTAT9270264TGGAAGAGAAAAAGAGGGGGGAAATAATCAGTTCCTTTAATCCTAAAAAT
Conger conger genome assembly, chromosome: 17.
OY741330.1:28206836-28206855
TGCATGCATGAGTGACTGAGAGATTGAGTG28206836TGGAAGAGAAAAAGAGGGGGTGGAACCCTCCCACTTCAAAGTAGTGTGAG
Quercus dentata isolate Qdleaves-2020 chromosome 4.
CP116447.1:29313603-29313622
AACTATAATAGCTACCAAATATGGCAGTGA29313603TGGAAGAGAAAAAGAGGGGGGTTGGGGGGTGTTGGTGTTCAGGAGCTTCA
Musa schizocarpa genome assembly, chromosome: S09.
LS990923.1:13963923-13963942
TTTGTGACGACATGATTGTTATTGATTCTA13963923TGGAAGAGAAAAAGAGGGGGGGTCACCCTTTTACTCTTTTCACTTTTGTT
Chenopodium album genome assembly, chromosome: 26.
OX419233.1:1077362-1077381
TTTGTTTTTCATTTTTTCCCCTTTTTTTCT1077362TGGAAGAGAAAAAGAGGGGGTTTGGGGGGGGGGGGGTGGGTGTGTTATAG
Sambucus nigra genome assembly, chromosome: 6.
OX422212.1:38289892-38289911
AAGAGAAGGAAAAGGAAAATAGGAAGGAAA38289892TGGAAGAGAAAAAGAGGGGGAGAGAGAGACGGAAGGGGAGAGAAAGAGAG
Polygonum maritimum genome assembly, chromosome: 5.
OZ002732.1:31300849-31300868
GTGGCCGACGTCGCCGCCTAGTGGATCCGG31300849TGGAAGAGAAAAAGAGGGGGAGAGGGGAGAGAAGAGAGAGAGAGGGAGAG
Spirometra erinaceieuropaei genome assembly, scaffold: SPER_scaffold0025013.
LN025462.1:603-622
GGCTCGGACAGTGCACGGGTACGTGAAAGT603TGGAAGAGAAAAAGAGGGGGGCCGACACTGGCGAATTCATCCTCATGGAA
Cerceris rybyensis genome assembly, chromosome: 13.
OU342801.1:977538-977557
AATAAGCCAACGCATGGAAGGGCAGGCAGA977538TGGAAGAGAAAAAGAGGGGGTGAAAGTGACAGAGAGAAAGTAGCATCGTG
Pyrrhosoma nymphula genome assembly, chromosome: 7.
OY754334.1:40647695-40647714
TCATAAGATATTCTCATATGAATTTTCGAG40647695TGGAAGAGAAAAAGAGGGGGTGCTGAAAAGTATTCTTGCCCAAGAAAAAT
Sepioteuthis lessoniana genome assembly, chromosome: 20.
OY757923.1:92377847-92377866
GAGTTTTTTTTTATTCACATCTCAAAATAA92377847TGGAAGAGAAAAAGAGGGGGCGAAGAGAATTAATGAAGAATGGAGGAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCCTCTTTTTCTCTTCCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCCTCTTTTTCTCTTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.362 | 0.354 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCCTCTTTTTCTCTTCCA&k=0&no_gap=0&offset=0&limit=50
0.514 | 0.151 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAAGAGAAAAAGAGGGGG&k=0&no_gap=0&offset=0&limit=13
0.524 | 0.010 | cgi_end;

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