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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 07:43:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1080649-1080670
CCCGACACCCCTTCCCTTTTTTTCCCCGGC1080649CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1080859-1080880
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1080859CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1083390-1083411
CCCGACCCCCCTTCCCTTTTTTTCCCCGGC1083390CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1084376-1084397
CCCGACACCCCTTCCCTTTTTTTCCCCGGC1084376CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1084586-1084607
CCCGGCCCCCCTTCTCTTTTTTTCCCCGGC1084586CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1085574-1085595
CCCGACCCCCCTTCCCTTTTTTTCCCCGGC1085574CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1086629-1086650
CCCGACACCCCTTCCCTTTTTTTCCCCGGC1086629CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1086838-1086859
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1086838CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1088175-1088196
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1088175CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1096077-1096098
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1096077CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1096883-1096904
CCCGACACCCCTTCCCTTTTTTTCCCCGGC1096883CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1097805-1097826
CCCGGCCCCCCTTCCCATTTTTTCCCCGGC1097805CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCACCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1103841-1103862
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1103841CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1108902-1108923
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1108902CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1165251-1165272
CCCGACACCCCTTCCCTTTTTTTCCCCGGC1165251CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1165461-1165482
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1165461CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1166221-1166242
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1166221CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1168613-1168634
CCCGACCCCCCTTCCCTTTTTTTCCCCGGC1168613CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1169553-1169574
CCCGACCCCCCTTCCCTTTTTTTCCCCGGC1169553CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1179962-1179983
CCCGGCCCCCCTTCCCTTTTTTTCCCCGGC1179962CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAAACACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1180632-1180653
CCCGACACCCCTTCCCTTTTTTTCCCCGGC1180632CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
Psittacula echo genome assembly, chromosome: 2.
OY725421.1:1181554-1181575
CCCGGCCCCCCTTCCCATTTTTTCCCCGGC1181554CCCCCTTCCCATTTTTTCCCCTAAACTCTTCTCTTTTTTCCCCGAACCACTT
CGN-16051 Pericarp Coffea canephora cDNA clone cccp6m17 5', mRNA sequence.
DV678322.1:102-123
TTTATTTCCGTTTTATTTTTCCGCTTCCCC102CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTACC
CGN-34394 Leaf Coffea canephora cDNA clone cccl16d20 5', mRNA sequence.
DV690872.1:94-115
TTTATTTCCGTTTTATTTTTCCGCTTCCCC94CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTACC
TransId-111046 CarCTFrHh24FL Coffea arabica cDNA clone CarCTFrHh24FL_Q2_02_K02_027.F similar to Symbol: None | oligouridylate-binding protein, putative, similar to oligouridylate binding protein (Nico
GR991591.1:149-170
TTTATTTCCGTTTTATTTTTCCGCTTCCCC149CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTACC
TransId-228543 CACATN1 Coffea arabica cDNA clone CACATN1-9151TV similar to Oligouridylate binding protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), mRNA sequence.
GR993575.1:155-176
TTTATTTCCGTTTTATTTTTCCGCTTCCCC155CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTACC
TransId-228395 CACATN1 Coffea arabica cDNA clone CACATN1-8Z80TV similar to Oligouridylate binding protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), mRNA sequence.
GR993631.1:145-166
TTTATTTCCGTTTCATTTTTCCGCTTCCCC145CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTTCTTACC
TransId-218830 CACATN1 Coffea arabica cDNA clone CACATN1-5V72TV similar to Oligouridylate binding protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), mRNA sequence.
GR997733.1:155-176
TTTTATTTCCGTTTTATTTTTCCGCTTCCC155CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTGCC
TransId-211557 CACATN1 Coffea arabica cDNA clone CACATN1-3K67TV similar to Oligouridylate binding protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), mRNA sequence.
GT000853.1:159-180
TTTATTTCCGTTTTATTTTTCCGCTTCCCC159CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTACC
TransId-275351 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_75-C08-PAL17d similar to Oligouridylate binding protein - Nicotiana plumbaginifolia (Leadwort-leaved tobacco), mRNA sequence.
GT018871.1:153-174
TTTTATTTCCGTTTTATTTTTCCGCTTCCC153CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTACC
TSA: Nannospalax galili isotig22357.Nagamubr mRNA sequence.
JL990280.1:278-299
TCCTAAGGCTTTTCTTTTCAGCAATGTTTC278CCCCCTTCCCATTTTTTCCCCTCAGATTTCTCCTTATTTGCTAGAACTAGTA
AFP0ABA81YO11RM1 BAC end, cultivar HD200-94 of Coffea canephora, genomic survey sequence.
FO656910.1:163-184
TTATTTCCGTTTTATTTTTCCGCTTCCCCC163CCCCCTTCCCATTTTTTCCCCTTTTTCAAGCCCTAATCTTCAACTCCTTACC
Dolichovespula media genome assembly, chromosome: 8.
OU426858.1:7645490-7645511
CACGATTTTTCTTACGGCACTTTCATCGTC7645490CCCCCTTCCCATTTTTTCCCCTTTTTTTTCGACAATTCGTTTCGTTCCCGTT
CA-H12_02_C08 Coffee SSH library 1 Coffea arabica cDNA, mRNA sequence.
CF588663.1:239-260
GGTAAGGAGTTGAAGATTAGGGCTTGAAAA239AGGGGAAAAAATGGGAAGGGGGGGGAAGCGGAAAAATAAAACGGAAATAAAA
Anisus vortex genome assembly, chromosome: 15.
OX421506.1:5007335-5007356
TATTTCAACTAATCTGTCATTAAAGTCATA5007335AGGGGAAAAAATGGGAAGGGGGGGAACAACAACTACACTCCAGCAATACGCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCCTTCCCATTTTTTCCCCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCCTTCCCATTTTTTCCCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.991 | 0.982 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCCTTCCCATTTTTTCCCCT&k=0&no_gap=0&offset=0&limit=50
1.142 | 0.152 | search_minus_done; http://172.18.8.135:50400/match?q=AGGGGAAAAAATGGGAAGGGGG&k=0&no_gap=0&offset=0&limit=17
1.143 | 0.001 | cgi_end;

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