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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 16:10:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Limanda limanda genome assembly, chromosome: 9.
OY755000.1:8409931-8409950
GAGCTGCTCATTGTTATGATGCTTATGCCC8409931CCCCGAAAGAAAGACAGAAAGAACTGATTAGCAAATTGACTGTTTGTTGG
GM_WBb0047I01.r GM_WBb Glycine max genomic clone GM_WBb0047I01 3', genomic survey sequence.
ED703695.1:473-492
AGGTGGCTGCACTAACTAATCTAAGTAAGA473CCCCGAAAGAAAGACAGAAAACCCAATCTTTATATCAATATCCGTACAAA
Glycine max cultivar Williams 82 chromosome 4.
CP126429.1:21124172-21124191
AGGTGGCTGCACTAACTAATCTAAGTAAGA21124172CCCCGAAAGAAAGACAGAAAACCCAATCTTTATATCAATATCCGTACAAA
Mus spretus genome assembly, chromosome: X.
OW971681.1:2632375-2632394
TCTTTCTTTCTTTCTTTCTGTCTTTCTGTC2632375TTTCTGTCTTTCTTTCGGGGAGGTGGTTTCGAGACAGGGTTTCTTTGTGT
Chionomys nivalis genome assembly, chromosome: 2.
OX465450.1:40534274-40534293
TGTCTTTTTCCCCCTCTCTCCTTTCCTTTC40534274TTTCTGTCTTTCTTTCGGGGGGGGGGGTACAAAAACTCAATAGGTAACTT
sf85a03.y1 Gm-c1019 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1019-2885 5', mRNA sequence.
AW277661.1:357-376
TTTGTACGGATATTGATATAAAGATTGGGT357TTTCTGTCTTTCTTTCGGGGTCTTACTTAGATTAGTTAGTG
saf37e09.y4 Gm-c1077 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1077-618 5', mRNA sequence.
BI892758.1:296-315
TTTGTACGGATATTGATATAAAGATTGGGT296TTTCTGTCTTTCTTTCGGGGTCTTACTTAGATTAGTTAGTGCAGCCACCT
sai62d11.y1 Gm-c1068 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1068-3238 5', mRNA sequence.
BI893177.1:269-288
TTTGTACGGATATTGATATAAAGATTGGGT269TTTCTGTCTTTCTTTCGGGGTCTTACTTAGATTAGTTAGTGCAGCCACCT
sam19f04.y1 Gm-c1068 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1068-5263 5', mRNA sequence.
BM886667.1:293-312
TTTGTACGGATATTGATATAAAGATTGGGT293TTTCTGTCTTTCTTTCGGGGTCTTACTTAGATTAGTTAGTGCAGCCACCT
sat53b07.y2 Gm-c1056 Glycine soja cDNA clone SOYBEAN CLONE ID: Gm-c1056-5054 5', mRNA sequence.
CA782721.1:273-292
TTTGTACGGATATTGATATAAAGATTGGGT273TTTCTGTCTTTCTTTCGGGGTCTTACTTAGATTAGTTAGTGCAGCCACCT
Glycine max cDNA, clone: GMFL02-25-I10, 5'end.
DB964251.1:306-325
TTTGTACGGATATTGATATAAAGATTGGGT306TTTCTGTCTTTCTTTCGGGGTCTTACTTAGATTAGTTAGTGCAGCCACCT
Bombus sylvestris genome assembly, chromosome: 9.
OU443158.1:1695637-1695656
TGTTAAAGTGGGTGTAAAATGTAGTTAAAA1695637TTTCTGTCTTTCTTTCGGGGAGTTGGTATTAAGTTAGAACGATTGAAATG
Anopheles darlingi genome assembly, chromosome: 2.
OX030911.1:80722460-80722479
TTTTGCCCCGGGATGCCGGTTGGCTTCCAA80722460TTTCTGTCTTTCTTTCGGGGTGTGAGGGTGTGAGTGAGGGTGTGCGACGC
Eudasyphora cyanicolor genome assembly, chromosome: 2.
OZ005735.1:21312492-21312511
TGTCACAAAAAAAGTGACCCCCTCTCTTTC21312492TTTCTGTCTTTCTTTCGGGGGTAAACGAAATTTAATTTAATTTAATACTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCGAAAGAAAGACAGAAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCGAAAGAAAGACAGAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.276 | 0.267 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCGAAAGAAAGACAGAAA&k=0&no_gap=0&offset=0&limit=50
0.538 | 0.261 | search_minus_done; http://172.18.8.135:50400/match?q=TTTCTGTCTTTCTTTCGGGG&k=0&no_gap=0&offset=0&limit=47
0.545 | 0.007 | cgi_end;

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