GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:00:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RK061A1E06.T3 Zebrafish Kidney Marrow cDNA library Danio rerio cDNA clone RK061A1E06 5', mRNA sequence.
CD590977.1:357-376
ACTTTCTCTCTCTTCCCTCCCCTTCCCCTC357CCCCTCACTCTAACCCTTCATGATCCCCCTCTCCTCCACGCACTTCTCCC
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:50839717-50839736
GAATCCAACCCTAGCCCACTCCTATAAATA50839717CCCCTCACTCTAACCCTTCATACATACACTTCATGCACTCTAAAACCCCC
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:97805025-97805044
CCGAACCAACCCTACCCCCTCCTATAAATA97805025CCCCTCACTCTAACCCTTCATACACACACCTCTCATACACCACAAAACCC
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:50983873-50983892
GAATCCAACCCTAGCCCACTCCTATAAATA50983873CCCCTCACTCTAACCCTTCATACATACACTTCATGCACTCTAAAACCCCC
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:97684279-97684298
CCGAACCAACCCTACCCCCTCCTATAAATA97684279CCCCTCACTCTAACCCTTCATACACACACCTCTCATACACCACAAAACCC
Arachis hypogaea DNA, clone: AHGS45M18.
DH961667.1:456-475
GGGCTTATGAGTGTATAAGAGGTGTGTGTA456TGAAGGGTTAGAGTGAGGGGTATTTATAGGAAAGGGGTAGGTTATGGTTC
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:88822800-88822819
GGGCTTATGAGTGTATAAGAGGTGTGTGTA88822800TGAAGGGTTAGAGTGAGGGGTATTTATAGGAAAGGGGTAGGTTATGGTTC
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:88858061-88858080
GGGCTTATGAGTGTAAAAGAGGTGTGTGTA88858061TGAAGGGTTAGAGTGAGGGGTATTTATAGGAAAAGGGTAGGTTATGGTTC
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:88671374-88671393
GGGCTTATGAGTGTAAAAGAGGTGTGTGTA88671374TGAAGGGTTAGAGTGAGGGGTATTTATAGGAAAAGGGTAGGTTATGGTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCCTCACTCTAACCCTTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCTCACTCTAACCCTTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.158 | 0.149 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCTCACTCTAACCCTTCA&k=0&no_gap=0&offset=0&limit=50
0.225 | 0.067 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAGGGTTAGAGTGAGGGG&k=0&no_gap=0&offset=0&limit=45
0.228 | 0.003 | cgi_end;

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