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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:05:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EL2200F Brassica embryo library (EL) Brassica napus cDNA clone EL2200 3', mRNA sequence.
CN827398.1:278-297
CTTTCAAACTCTATGCTCTTTACAACTTTA278CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
OL6946F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL6946, mRNA sequence.
EH425262.1:207-226
CTTTCAAACTCTATGCTCTTTACAACTTTA207CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
OL8335F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8335, mRNA sequence.
EH427851.1:194-213
CTTTCAAACTCTATGCTCTTTACAACTTTA194CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
0111556 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV106244.1:297-316
CTTTCAAACTCTATGCTCTTTACAACTTTA297CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
0113378 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV108066.1:286-305
CTTTCAAACTCTATGCTCTTTACAACTTTA286CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF04E02, 3'-end sequence.
FY069518.1:330-349
GCTTCAAACTCTATCCCCTTTACAACTTTA330CCCCTGAGAACCAAAACTCCAATTGAAGAACGGTTTCTGCTCCAGCGGGT
BOMLD74TR BO_2_3_KB Brassica oleracea genomic clone BOMLD74, genomic survey sequence.
BH679452.1:133-152
CTTTCAAACTCTATGCTCTTTACAACTTTA133CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
Brassica napus cultivar Xiang5A chromosome 1.
CP123876.1:37935503-37935522
GCTTCAAACTCTATTCCCTTTACAACTTTA37935503CCCCTGAGAACCAAAACTCCAATTGAAGAACGGTTTCTGCTCCAGCGGGT
Brassica napus genome assembly, chromosome: A02.
HG994356.1:32504605-32504624
GCTTCAAACTCTATTCCCTTTACAACTTTA32504605CCCCTGAGAACCAAAACTCCAATTGAAGAACGGTTTCTGCTCCAGCGGGT
Brassica napus genome assembly, chromosome: C02.
HG994366.1:60846295-60846314
CTTTCAAACTCTATGCTCTTTACAACTTTA60846295CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
Brassica rapa genome, scaffold: A02.
LR031573.1:30619328-30619347
GCTTCAAACTCTATCCCCTTTACAACTTTA30619328CCCCTGAGAACCAAAACTCCAATTGAAGAACGGTTTCTGCTCCAGCGGGT
Brassica oleracea HDEM genome, scaffold: C2.
LR031874.1:62329759-62329778
CTTTCAAACTCTATGCTCTTTACAACTTTA62329759CCCCTGAGAACCAAAACTCCAATTGAAGAAGGGTTTCTGCTCCAGCGGGT
Brassica rapa genome assembly, chromosome: A02.
LS974618.2:31553059-31553078
GCTTCAAACTCTATCCCCTTTACAACTTTA31553059CCCCTGAGAACCAAAACTCCAATTGAAGAACGGTTTCTGCTCCAGCGGGT
Vibrio parahaemolyticus strain D3112 chromosome 1, complete sequence.
CP034565.1:2948018-2948037
CTTGATCTTTTATATAATCTTCTATTCTTA2948018CCCCTGAGAACCAAAACTCCAAACTGTCATATTTAGAGAAAAACTCTGTC
Sequence 2033 from Patent WO2008034648.
FB782760.1:776-795
ACCCGCTGGAGCAGAAACCGTTCTTCAATT776GGAGTTTTGGTTCTCAGGGGTAA
Sequence 2247 from Patent WO2008034648.
FB782974.1:788-807
ACCCGCTGGAGCAGAAACCGTTCTTCAATT788GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
Sequence 7020 from Patent WO2008034648.
FB787747.1:776-795
ACCCGCTGGAGCAGAAACCGTTCTTCAATT776GGAGTTTTGGTTCTCAGGGGTAA
Sequence 7120 from Patent WO2008034648.
FB787847.1:788-807
ACCCGCTGGAGCAGAAACCGTTCTTCAATT788GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
Sequence 9530 from patent US 7960612.
GY267577.1:778-797
ACCCGCTGGAGCAGAAACCCTTCTTCAATT778GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
Sequence 9536 from patent US 7960612.
GY267583.1:780-799
ACCCGCTGGAGCAGAAACCGTTCTTCAATT780GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
Sequence 15397 from patent US 8030546.
GY467622.1:778-797
ACCCGCTGGAGCAGAAACCCTTCTTCAATT778GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
Sequence 15403 from patent US 8030546.
GY467628.1:780-799
ACCCGCTGGAGCAGAAACCGTTCTTCAATT780GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
Sequence 2033 from Patent EP2090662.
HB652819.1:776-795
ACCCGCTGGAGCAGAAACCGTTCTTCAATT776GGAGTTTTGGTTCTCAGGGGTAA
Sequence 2247 from Patent EP2090662.
HB653033.1:788-807
ACCCGCTGGAGCAGAAACCGTTCTTCAATT788GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
Sequence 7020 from Patent EP2090662.
HB657806.1:776-795
ACCCGCTGGAGCAGAAACCGTTCTTCAATT776GGAGTTTTGGTTCTCAGGGGTAA
Sequence 7120 from Patent EP2090662.
HB657906.1:788-807
ACCCGCTGGAGCAGAAACCGTTCTTCAATT788GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
Sequence 15397 from patent US 10597667.
MO978775.1:778-797
ACCCGCTGGAGCAGAAACCCTTCTTCAATT778GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
Sequence 15403 from patent US 10597667.
MO978781.1:780-799
ACCCGCTGGAGCAGAAACCGTTCTTCAATT780GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
23-E022722-021-012-N05-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022N0512Q, mRNA sequence.
CX194164.1:778-797
ACCCGCTGGAGCAGAAACCCTTCTTCAATT778GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
Brassica oleracea var. viridis mRNA, clone: KALE-099L09, 5' end sequence.
DK493686.1:803-822
ACCCGCTGGAGCAGAAACCCTTCTTCAATT803GGAGTTTTGGTTCTCAGGGGTAAAGTTGTA
Brassica oleracea var. viridis mRNA, clone: KALE-105K20, 5' end sequence.
DK495968.1:804-823
ACCCGCTGGAGCAGAAACCCTTCTTCAATT804GGAGTTTTGGTTCTCAGGGGTAAAGT
Brassica oleracea var. viridis mRNA, clone: KALE-111I11, 5' end sequence.
DK498206.1:806-825
ACCCGCTGGAGCAGAAACCCTTCTTCAATT806GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAAGAGTTTGAAA
Brassica oleracea var. viridis mRNA, clone: KALE-105E24, 3' end sequence.
DK555408.1:496-515
ACCCGCTGGAGCAGAAACCCTTCTTCAATT496GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
Brassica oleracea var. viridis mRNA, clone: KALE-111I11, 3' end sequence.
DK557778.1:408-427
ACCCGCTGGAGCAGAAACCCTTCTTCAATT408GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
BNDH4DCT_UP_031_D09_17DEC2004_073 Brassica napus seeds BNDH4DCT Brassica napus cDNA 5', mRNA sequence.
DY007449.1:228-247
ACCCGCTGGAGCAGAAACCCTTCTTCAATT228GGAGTTTTGGTTCTCAGGGGAAAAGTTGTAAAGAGCATAGAGTTTGAAAG
56ACAC48_UP_010_G02_30AUG2004_004 Brassica napus Brassica napus cDNA 5', mRNA sequence.
EE412916.1:393-412
ACCCGCTGGAGCAGAAACCCTTCTTCAATT393GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
64ETCOT5_T3_007_G10_12JAN2005_068 Brassica napus mature seed Normalized library at CoT 5 Brassica napus cDNA 5', mRNA sequence.
EE437752.1:94-113
ACCCGCTGGAGCAGAAACCGTTCTTCAATT94GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
BNSCS5CT_UP_019_C09_21JAN2005_075 Brassica napus seed coat BNSCS5CT Brassica napus cDNA 5', mRNA sequence.
EE471972.1:176-195
ACCCGCTGGAGCAGAAACCGTTCTTCAATT176GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
BNSCS5CT_UP_032_C08_26JAN2005_060 Brassica napus seed coat BNSCS5CT Brassica napus cDNA 5', mRNA sequence.
EE473044.1:299-318
ACCCGCTGGAGCAGAAACCCTTCTTCAATT299GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
BNQA_UP_083_G04_01JUN2005_020 Brassica napus BNQA Brassica napus cDNA 5', mRNA sequence.
EE553040.1:92-111
ACCCGCTGGAGCAGAAACCCTTCTTCAATT92GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
OL8335R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL8335, mRNA sequence.
EH427838.1:211-230
ACCCGCTGGAGCAGAAACCCTTCTTCAATT211GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
BNARO1GH_T3_020_H08_23NOV2006_050 Brassica napus BNARO1GH Brassica napus cDNA 5', mRNA sequence.
ES901287.1:282-301
ACCCGCTGGAGCAGAAACCGTTCTTCAATT282GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
BNARO2GH_T3_011_H10_15DEC2006_066 Brassica napus BNARO2GH Brassica napus cDNA 5', mRNA sequence.
ES911601.1:205-224
ACCCGCTGGAGCAGAAACCCTTCTTCAATT205GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
0111798 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV106486.1:639-658
ACCCGCTGGAGCAGAAACCCTTCTTTCATT639GGAGTTTTGGTTCTCAGGGGTAAAGTTTGTAAGAGCATAGAGTTTNGAAG
0113639 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV108327.1:265-284
ACCCGCTGGAGCAGAAACCCTTCTTCAATT265GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
0100298 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV199145.1:315-334
ACCCGCTGGAGCATAAACCCTTCTTCAATT315GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
0100384 Brassica napus Cold acclimation - light Brassica napus cDNA, mRNA sequence.
EV199231.1:442-461
ACCCGCTGGAGCAGAAACCCTTCTTCAATT442GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
g03_20na_1h.s 20na Brassica napus cDNA clone g03_20na_1h 5, mRNA sequence.
GT085373.1:774-793
ACCCGCTGGAGCAGAAACCCTTCTTCAATT774GGAGTTTTGGTTCTCAGGGGTAA
Brassica napus NAC-domain protein 5-1 (NAC5-1) mRNA, complete cds.
AY245881.1:780-799
ACCCGCTGGAGCAGAAACCGTTCTTCAATT780GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGGGGATAGAGTTTGAAGC
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:1518982-1519001
ACCCGCTGGAGCAGAAACCCTTCTTCAATT1518982GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG
Brassica napus NAC transcription factor 102-1 (NAC102-1.1) mRNA, complete cds.
KF974766.1:773-792
ACCCGCTGGAGCAGAAACCCTTCTTCAATT773GGAGTTTTGGTTCTCAGGGGTAAAGTTGTAAAGAGCATAGAGTTTGAAAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCCTGAGAACCAAAACTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCCTGAGAACCAAAACTCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.507 | 0.499 | search_plus_done; http://172.18.8.135:50400/match?q=CCCCTGAGAACCAAAACTCC&k=0&no_gap=0&offset=0&limit=50
1.964 | 1.457 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGTTTTGGTTCTCAGGGG&k=0&no_gap=0&offset=0&limit=36
1.989 | 0.024 | cgi_end;

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