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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:03:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus vulgaris genome assembly, chromosome: 1.
LR738611.1:24603582-24603598
GAGCCTGCCCTGGCAGGGAGGTGGCCGTGG24603582CCCGAAGAGACGCTATTTGGATGATGCTATGTGGATGACCTTCACCC
Myotis daubentonii genome assembly, chromosome: X.
OY725362.1:72783307-72783323
GCTGATCTTACTGATCAACCCCTTGTCAAC72783307CCCGAAGAGACGCTATTTACAGATTGAAATAGCTTCATTGCGAATGG
Sequence 18 from Patent WO2014080034.
JC528728.1:1-17
1CCCGAAGAGACGCTATT
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:54628038-54628054
AAAGCACTCGGGGGCTCGAGCACAGACTCC54628038CCCGAAGAGACGCTATTTTGGCTTACGCGACATTACTCAAAGCACTT
Halorubrum sp. PV6 chromosome, complete genome.
CP030064.1:1838390-1838406
CAATATCTCGAACCCCCTCTCTGGGGTATG1838390CCCGAAGAGACGCTATTCGAATTCGAGCGAGACATGACCGCCGCCGA
Cyaniris semiargus genome assembly, chromosome: Z.
LR994547.1:17519629-17519645
TGGGTATGATGGAGGTGCATTGCACGGCCT17519629CCCGAAGAGACGCTATTACGTTGGCAGGTTCGTTAGCACTCTCAGAA
Blastobasis adustella genome assembly, chromosome: 22.
OU026136.1:1058137-1058153
GGAATAGCCAGTATCGCCGGGTAGCGGCGG1058137CCCGAAGAGACGCTATTAATTACTTAGATATATTCGGAAGTCAATTG
Eristalis pertinax genome assembly, chromosome: 2.
OU026146.1:26780946-26780962
GGAGTCGTGTCAACCTCATCGCATTTGAAT26780946CCCGAAGAGACGCTATTTCTTCCTCGTGTCTGTGACTTATACAACCA
Diabrotica balteata genome assembly, chromosome: 1.
OU898276.1:19727289-19727305
TAAAAGCCGCTCTGGCATTTTGGCCAACAA19727289CCCGAAGAGACGCTATTAATTATTGTCATCTGTGTCTTTGGACGGAA
Phymatocera aterrima genome assembly, chromosome: 12.
OY720670.1:1496018-1496034
TTGCCTCTGGTAACACGCACGCGTATACCT1496018CCCGAAGAGACGCTATTGTTGGAGAGAGGTACGACACGAGATGAGAT
Apodemus sylvaticus genome assembly, chromosome: 15.
OX359312.1:24278169-24278185
CAGAATTAAAAATTCAATGACAGGAATTCA24278169AATAGCGTCTCTTCGGGGCTTATCTTCTCAGTGTTTGGGCTTTTGTG
Ramazzottius varieornatus cDNA, clone: cYOK-086H15, 5' end sequence.
HY438054.1:829-845
CTAATCAAGACAACGGCGCCCATGTTCCAC829AATAGCGTCTCTTCGGGAGCACTGTTTGGTCAACTGCGGCGATGAAA
Phoenix dactylifera microsatellite DNA, clone CIR078.
AJ571685.1:211-227
CTCCCTTTTTGCACCTGAAAGAGAGAGAGG211AATAGCGTCTCTTCGGGGGGGGAAAAAATATGAGTCTAACCCTCCTT
Leptosphaeria biglobosa Thlaspii ibcn65_scaffold00060 complete sequence.
FO905841.1:80458-80474
AGAAGAGGCTTTCGCAGACCTTGACAGTCT80458AATAGCGTCTCTTCGGGCACGTATAATATAAAGCTATCAAATAAATG
Hermetia illucens genome assembly, chromosome: 2.
LR899010.1:189144635-189144651
AAAGATTCCCAAGACATAACAATAGGGAGA189144635AATAGCGTCTCTTCGGGAACAGTAGGGGCCACAAGAAACAGCTCTGC
Plagodis pulveraria genome assembly, chromosome: Z.
OY982949.1:42340269-42340285
ACAAAAAATTGTTTCTTACAAAGCTAATAG42340269AATAGCGTCTCTTCGGGTTACTTTCTCGAAGTTTGAATGTAATCCGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCGAAGAGACGCTATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCGAAGAGACGCTATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.387 | 0.378 | search_plus_done; http://172.18.8.135:50400/match?q=CCCGAAGAGACGCTATT&k=0&no_gap=0&offset=0&limit=50
0.593 | 0.206 | search_minus_done; http://172.18.8.135:50400/match?q=AATAGCGTCTCTTCGGG&k=0&no_gap=0&offset=0&limit=40
0.600 | 0.007 | cgi_end;

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