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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-03-15 18:05:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Trifolium repens isolate ACLI19 chromosome 04_Occ.
CP125842.1:7131876-7131895
AAGAAGGCAGCCAGATGACAAATAAAATTA7131876CCCGACAACACAAAGAACCTGCAACAATTTAATCAGAGTCTGACTTAGCA
Trifolium repens isolate ACLI19 chromosome 04_Pall.
CP125843.1:8147833-8147852
AAGAAGGAAGCCAGATGACAAATAAAATTA8147833CCCGACAACACAAAGAACCTGCAACAATTTAATCACAGACTGACTTAGCA
Thecophora atra genome assembly, chromosome: 1.
OW569397.1:3838784-3838803
TACGACTTGTTACATCATAACTAACAGTTT3838784CCCGACAACACAAAGAACCTGCCAGGGCCAAGTGAGATCCCAAGAGGTAT
Trifolium pratense cDNA clone:RCE13829.
BB914296.1:294-313
GGGCTGCTATCGGGATGCTAATTATTATAG294AGGTTCTTTGTGTTGTCGGGTAATTTTATTTGTCATCTGGCTTCCTTTAT
Trifolium repens mRNA, clone: WCC15m18_087, unspecified EST.
FY459476.1:262-281
GGGCTGCTATCGGGATGCTAATTATTATAG262AGGTTCTTTGTGTTGTCGGGTAATTTTATTTGTCATCTGGCTTCCTTCTT
Trifolium repens mRNA, clone: WCC25j09_038, unspecified EST.
FY462947.1:287-306
GGGCTGCTATCGGGATGCTAATTATCATAG287AGGTTCTTTGTGTTGTCGGGTAATTTTATTTGTCATCTGGCTTCCTTCTT
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:58954541-58954560
TGCTAAGTCATGCTCTGATTAAATTGTTGC58954541AGGTTCTTTGTGTTGTCGGGTAATTTTATTTGTCATCTGGCTTCCTTCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCGACAACACAAAGAACCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCGACAACACAAAGAACCT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=CCCGACAACACAAAGAACCT&k=0&no_gap=0&offset=0&limit=50
0.314 | 0.211 | search_minus_done; http://172.18.8.135:50400/match?q=AGGTTCTTTGTGTTGTCGGG&k=0&no_gap=0&offset=0&limit=47
0.317 | 0.003 | cgi_end;

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