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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 14:56:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Triticum monococcum genome assembly, chromosome: 3A.
OY737852.1:17242201-17242220
GCGTCATGTAGTAATATGGACGCCCCTCCG17242201CCCGGTCTATTTTCCCTTTTGTGTACTACTGGCTAACTGAAACGTGCTAA
Triticum monococcum genome assembly, chromosome: 3A.
OY737860.1:15442270-15442289
GCGTCATGTAGTAATATGGACGCCCCTCCC15442270CCCGGTCTATTTTCCCTTTTGTGTACTACTGGCTAACTGAAACGTGCTAA
Hydrogenibacillus sp. N12 chromosome, complete genome.
CP080953.1:1181656-1181675
GAGCGGCCCTTTTTGCCGCCGGTCGAAGGT1181656CCCGGTCTATTTTCCCTTTTCTCAGCCGGCTCAAGACCGGCCAGCCCCAG
Solanum verrucosum cultivar 11H23 chromosome 4.
CP133615.1:63825024-63825043
TAAAAAATATTTTCAACTATTAAACGGAAT63825024AAAAGGGAAAATAGACCGGGTTTGTCAAAGTCATAAGGTCTCAGACCAAA
Alentia gelatinosa genome assembly, chromosome: 10.
OX465588.1:9753333-9753352
ATGAATTTGAAATATTTCAAGGTGTATGAT9753333AAAAGGGAAAATAGACCGGGCATTTAATATGTAAATGAATACTCGCTCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCGGTCTATTTTCCCTTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCGGTCTATTTTCCCTTTT | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.162 | 0.153 | search_plus_done; http://172.18.8.135:50400/match?q=CCCGGTCTATTTTCCCTTTT&k=0&no_gap=0&offset=0&limit=50
0.267 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=AAAAGGGAAAATAGACCGGG&k=0&no_gap=0&offset=0&limit=47
0.268 | 0.002 | cgi_end;

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