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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:24:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arachis hypogaea cultivar Shitouqi chromosome A02.
CP030984.1:72009782-72009801
ATCTTAGTATGTGGACATTGCTAGGGTACT72009782CCCGTAGTGACAAGCACTGAGTTAAATGCTTTAGGGATTGGAATGTATGA
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:12306312-12306331
ATCTAAGTATGTGGATATTGTTAGGGTAGT12306312CCCGTAGTGACAAGCACTGAGTAAAATGCTTTAGGGACTGGACTATGTGA
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:2185169-2185188
ATCTAAGTATGTGGACATTGTTAGGGTAGT2185169CCCGTAGTGACAAGCACTGAGTAAAATGCTTTAGAAATCGGTCTGTAGGA
Arachis hypogaea cultivar Shitouqi chromosome A09.
CP030991.1:23882244-23882263
TCATACAGTCTAATCCCTAAAGCATTTTAC23882244TCAGTGCTTGTCACTACGGGACTACCCTAACAATATCCACATACTTAGAT
Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:137784225-137784244
TCCTACAGACTAATTCCTAAAGCATTTTAC137784225TCAGTGCTTGTCACTACGGGACTACCTTAACAATGTCCACATACTTAGAT
Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:136738946-136738965
TCCTACAGACTAATTCCTAAAGCATTTTAC136738946TCAGTGCTTGTCACTACGGGACTACCTTAACAATGTCCACATACTTAGAT
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737377.1:40448935-40448954
GAGATTGATTTTACTATGACTATGCTATGC40448935TCAGTGCTTGTCACTACGGGCCGAGTGTCATGATTTCAGATCTGGACCTA
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737384.1:38585875-38585894
GAGATTGATTTTACTATGACTATGCTATGC38585875TCAGTGCTTGTCACTACGGGCCGAGTGTCATGATTTCAGATCTGGACCTA
Hordeum bulbosum genome assembly, chromosome: 1H_1.
OY737409.1:38831199-38831218
GAGATTGATTTTACTATGACTATGCTATGC38831199TCAGTGCTTGTCACTACGGGCCGAGTGTCATGATTTCAGATCTGGACCTA
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737416.1:33903282-33903301
GAGATTGATTTTACTATGACTATGCTATGC33903282TCAGTGCTTGTCACTACGGGCCGAGTGTCATGATTTCAGATCTGGACCTA
Hordeum bulbosum genome assembly, chromosome: 1H_2.
OY737434.1:32253526-32253545
GAGATTGATTTTACTATGACTATGCTATGC32253526TCAGTGCTTGTCACTACGGGCCGAGTGTCATGATTTCAGATCTGGACCTA
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737625.1:34066544-34066563
GAGATTGATTTTACTATGACTATGCTATGC34066544TCAGTGCTTGTCACTACGGGCCGAGTGTCATGATTTCAGATCTGGACCTA
Hordeum bulbosum genome assembly, chromosome: 1H_3.
OY737625.1:34086178-34086197
GAGATTGATTTTACTATGACTATGCTATGC34086178TCAGTGCTTGTCACTACGGGCCGAGTGTCATGATTTCAGATCTGGACCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCGTAGTGACAAGCACTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCGTAGTGACAAGCACTGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.167 | 0.159 | search_plus_done; http://172.18.8.135:50400/match?q=CCCGTAGTGACAAGCACTGA&k=0&no_gap=0&offset=0&limit=50
0.241 | 0.074 | search_minus_done; http://172.18.8.135:50400/match?q=TCAGTGCTTGTCACTACGGG&k=0&no_gap=0&offset=0&limit=47
0.248 | 0.006 | cgi_end;

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