GGGenome | Results

Help | Japanese

2025-04-06 17:13:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

KS20005E08 KS20 Capsicum annuum cDNA, mRNA sequence.
GD093782.1:117-136

ATTCGAAGGCTGAGGAAGGCCCAGCTACTG117CCCGTTGATGATTAGCCAGTTGACAACAACAACAACAATAATAATAATAA

Capsicum annuum Takanotsume DNA, chromosome 4, sequence.
AP026699.1:51668747-51668766

ATTCGAAGGCTGAGGAAGGCCCAGCTACTG51668747CCCGTTGATGATTAGCCAGTTGACAACAACAACAACAATAATAATAATAA

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 4.
CP124728.1:201658625-201658644

TTATTATTATTATTGTTGTTGTTGTTGTCA201658625ACTGGCTAATCATCAACGGGCAGTAGCTGGGCCTTCCTCAGCCTTCGAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.008 | 0.008 | search_start;
0.186 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=CCCGTTGATGATTAGCCAGT&k=0&no_gap=0&offset=0&limit=50
0.215 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=ACTGGCTAATCATCAACGGG&k=0&no_gap=0&offset=0&limit=48
0.215 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).