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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-08 20:21:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rangifer tarandus platyrhyncus genome assembly, chromosome: X.
OX460343.1:25543374-25543393
CTATGTTTGCTTCATTTTCTATATTCTTAT25543374CCCTAAATCAACCCCAAATTCCTCCCAGTATATTCATGTTTGTCAAGTGT
Apteryx australis mantelli genome assembly, scaffold: scaffold27.
LK391419.1:38316051-38316070
ATTTCAAATAATGTAGTGAGAAAGCACTTT38316051CCCTAAATCAACCCCAAATTTACACAGTTATGAAAACAGTTCAGTTAACA
Rana temporaria genome assembly, chromosome: 2.
LR991681.1:198003385-198003404
GGACCTGATTGTACCGCCCTTGTGAAAGGA198003385CCCTAAATCAACCCCAAATTTGCACTAATTCCACCAAATCCCCTTACATA
KS01062G11 KS01 Capsicum annuum cDNA, mRNA sequence.
BM064075.1:9-28
CTGTAAAA9CCCTAAATCAACCCCAAATTCAATCTCTCTCTCTAAAAATCCTCTCTCTC
TSA: Capsicum annuum MGMT_Contig16147, mRNA sequence.
JW066391.1:4178-4197
ACAGCTAGAACTTTGCTTCTCTCTGTAAAA4178CCCTAAATCAACCCCAAATTCAATCTCTCTCTCTCTAAAAATCCTCTCTC
Solanum tuberosum cultivar MSH/14-112 chromosome 1.
CP046702.1:78487806-78487825
AATTTCAAATTCAAATTTCGACCGTTTTCC78487806CCCTAAATCAACCCCAAATTCCTCTGTATAAACCTCCATCTTCTTTAATG
Solanum pinnatisectum cultivar CGN17745 chromosome 1.
CP047567.1:78459806-78459825
NNNNNNNNNNNNNNNNNNNNNNNNNTTTCC78459806CCCTAAATCAACCCCAAATTCCTCTATATAAACNNNNNNNNNNNNNNNNN
Solanum tuberosum cultivar Solyntus chromosome 1.
CP055234.1:44805725-44805744
AATTTCAAATTCAAATTTCGACCGTTTTCC44805725CCCTAAATCAACCCCAAATTCCTCTGTATAAACCTCCATCTTCTTTAATG
Solanum tuberosum cultivar Solyntus chromosome 6.
CP055239.1:32015794-32015813
GAATTTCAAATTTAAAATTATATTGTTTTT32015794CCCTAAATCAACCCCAAATTCCCTTTATATAAACTTCCATTTTTCTTTAG
Capsicum annuum clone BAC CaCM421A08 genomic sequence.
GU108230.1:21137-21156
CCATTTTTTATTTTTCTTCTCTCTGTAAAA21137CCCTAAATCAACCCCAAATTCAATCTCTCTCTCTCTAAAAATCCTCTCTC
Trifolium fragiferum genome assembly, chromosome: 2.
OX940790.1:26543741-26543760
TAACCTAAAAAACTCCCTATAAATCTCATA26543741CCCTAAATCAACCCCAAATTTTCTACAAACCCTAGAAATCAAAGAATTCA
Viscum album genome assembly, chromosome: 10_4.
OY728166.1:535405282-535405301
CTTGAATAATTGAACCCAGTGAGCCAAGAA535405282CCCTAAATCAACCCCAAATTCATCATTTTAGAGTTTAATGAAAAAAATGA
Pseudoalteromonas piscicida strain 2515 chromosome, complete genome.
CP074587.1:1127965-1127984
TTGCATCGCCTGAGCAGTCGCCAAACTACG1127965CCCTAAATCAACCCCAAATTGCAACGCTGCGGTTAGCACATCGCGTGAAA
Eupeodes luniger genome assembly, chromosome: 1.
OX608073.1:159613203-159613222
TGCTGCGAATTCACAACCACGTTCACCAAA159613203CCCTAAATCAACCCCAAATTAAACGAGGCTGCTGTTACCGCGGCAAACAG
Cervus elaphus genome assembly, chromosome: X.
OU343077.1:150595389-150595408
ACACTTGACAAACATGAATATACTGAGAGG150595389AATTTGGGGTTGATTTAGGGATAAGAATATAGAAAATGAAGCAAACATAG
Coregonus sp. 'balchen' genome assembly, chromosome: 34.
LR778286.1:40230513-40230532
TAGGGGGGGGAAAATTTAGACGGGTTTTAA40230513AATTTGGGGTTGATTTAGGGGTTTTTTATGTGGGGGTCCCCCGTTTATGG
Rana temporaria genome assembly, chromosome: 8.
LR991687.1:122974662-122974681
ATATAAATAAGCAAAATCAATATTTATAAC122974662AATTTGGGGTTGATTTAGGGCATGCAAGGGAATTTTCACTTTGCAGAGGT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:241098582-241098601
GAGAGAGAGGATTTTTAGAGAGAGAGATTG241098582AATTTGGGGTTGATTTAGGGTTTTACAGAGAGAAGAAAAATAAAAAATGG
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:245567985-245568004
GAGAGAGGATTTTTAGAGAGAGAGAGATTG245567985AATTTGGGGTTGATTTAGGGTTTTACAGAGAGAAGAAAAATAAAAAATGG
Hedera helix genome assembly, chromosome: 1.
OX359264.1:42794062-42794081
TTTACTTCAGGGCGGCTGCTAGGTTTAAGG42794062AATTTGGGGTTGATTTAGGGCGGCAGGTTGTGGTGGGGAGACACATGTAA
Sambucus nigra genome assembly, chromosome: 2.
OX422208.1:582086390-582086409
CTCTCTCTATACATATTTATCTTGATGTTA582086390AATTTGGGGTTGATTTAGGGTTAAATTTCTAATGTTTGTTAGAGTTAAAT
Pseudoalteromonas sp. NC201 chromosome, complete genome.
CP022522.1:943790-943809
TTTCACGCGATGTGCTAACCGCAGCGTTGC943790AATTTGGGGTTGATTTAGGGCGTAGTTTGGCGACTGCTCAGGCGATGCAA
Pseudoalteromonas sp. M8 chromosome 2, complete sequence.
CP047240.1:943541-943560
TTTCACGCGATGTGCTAACCGCAGCGTTGC943541AATTTGGGGTTGATTTAGGGCGTAGTTTGGCGACTGCTCAGGCGATGCAA
Pseudoalteromonas sp. JC3 chromosome 1, complete sequence.
CP127855.1:999951-999970
TTTCACGCGATGTGCTAACCGCAGCGTTGC999951AATTTGGGGTTGATTTAGGGCGTAGTTTGGCGACTGCTCAGGCGATGCAA
Culex pipiens genome assembly, chromosome: 3.
OZ004313.1:77317518-77317537
GCCGACTCCAAACAAGAAACAATTCCAGTA77317518AATTTGGGGTTGATTTAGGGTTGACCTCTGCCGGAAGTGCTACACAGCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTAAATCAACCCCAAATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTAAATCAACCCCAAATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.151 | 0.142 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTAAATCAACCCCAAATT&k=0&no_gap=0&offset=0&limit=50
0.199 | 0.048 | search_minus_done; http://172.18.8.135:50400/match?q=AATTTGGGGTTGATTTAGGG&k=0&no_gap=0&offset=0&limit=36
0.206 | 0.007 | cgi_end;

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