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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:22:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
HG994375.1:545963219-545963238
GCCCAGAGCCCGTACGACGCCGCCCCCATT545963219CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR722617.1:596788975-596788994
GCCCAGAGCCCGTACGACGCCGCCCCCATT596788975CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR812971.1:596788975-596788994
GCCCAGAGCCCGTACGACGCCGCCCCCATT596788975CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR824633.1:591274183-591274202
GCCCAGAGCCCGTACGACGCCGCCCCCATT591274183CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828102.2:605497869-605497888
GCCCAGAGCCCGTACGACGCCGCCCCCATT605497869CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828116.1:576836985-576837004
GCCCAGAGCCCGTACGACGCCGCCCCCATT576836985CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828147.2:592525938-592525957
GCCCAGAGCCCGTACGACGCCGCCCCCATT592525938CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828168.1:589477914-589477933
GCCCAGAGCCCGTACGACGCCGCCCCCATT589477914CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828267.1:588849159-588849178
GCCCAGAGCCCGTACGACGCCGCCCCCATT588849159CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR865396.1:570697061-570697080
GCCCAGAGCCCGTACGACGCCGCCCCCATT570697061CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR890097.1:588230952-588230971
GCCCAGAGCCCGTACGACGCCGCCCCCATT588230952CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459903.1:580369331-580369350
GCCCAGAGCCCGTACGACGCCGCCCCCATT580369331CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX459917.1:578658219-578658238
GCCCAGAGCCCGTACGACGCCGCCCCCATT578658219CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459978.1:578933890-578933909
GCCCAGAGCCCGTACGACGCCGCCCCCATT578933890CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX459985.1:579858376-579858395
GCCCAGAGCCCGTACGACGCCGCCCCCATT579858376CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX460034.1:580223851-580223870
GCCCAGAGCCCGTACGACGCCGCCCCCATT580223851CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460055.1:585746779-585746798
GCCCAGAGCCCGTACGACGCCGCCCCCATT585746779CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460076.1:581129891-581129910
GCCCAGAGCCCGTACGACGCCGCCCCCATT581129891CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460101.1:580814301-580814320
GCCCAGAGCCCGTACGACGCCGCCCCCATT580814301CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460146.1:580842834-580842853
GCCCAGAGCCCGTACGACGCCGCCCCCATT580842834CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460153.1:581064358-581064377
GCCCAGAGCCCGTACGACGCCGCCCCCATT581064358CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460174.1:579320913-579320932
GCCCAGAGCCCGTACGACGCCGCCCCCATT579320913CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460223.1:584400883-584400902
GCCCAGAGCCCGTACGACGCCGCCCCCATT584400883CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460230.1:583010966-583010985
GCCCAGAGCCCGTACGACGCCGCCCCCATT583010966CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 1H.
OX460257.1:484473002-484473021
GCCCAGAGCCCGTACGACGCCGCCCCCATT484473002CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460272.1:583103656-583103675
GCCCAGAGCCCGTACGACGCCGCCCCCATT583103656CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX460286.1:583649813-583649832
GCCCAGAGCCCGTACGACGCCGCCCCCATT583649813CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare genome assembly, chromosome: 2H.
OX638757.1:581544243-581544262
GCCCAGAGCCCGTACGACGCCGCCCCCATT581544243CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX638792.1:580634120-580634139
GCCCAGAGCCCGTACGACGCCGCCCCCATT580634120CCCTACGACTATGGCTACGCACCTGCGCAGCCCAGCTACGGACTCGGTGC
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0183N17, *** SEQUENCING IN PROGRESS ***, 85 unordered pieces.
AC261887.1:156280-156299
GCACCGAGTCCGTAGCTGGGCTGCGCAGGT156280GCGTAGCCATAGTCGTAGGGAATGGGGGCGGCGTCGTACGGGCTCTGGGC
Hordeum vulgare subsp. vulgare cultivar Morex clone BAC 0135J06, *** SEQUENCING IN PROGRESS ***, 89 unordered pieces.
AC264982.1:112933-112952
GCACCGAGTCCGTAGCTGGGCTGCGCAGGT112933GCGTAGCCATAGTCGTAGGGAATGGGGGCGGCGTCGTACGGGCTCTGGGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTACGACTATGGCTACGC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTACGACTATGGCTACGC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.275 | 0.266 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTACGACTATGGCTACGC&k=0&no_gap=0&offset=0&limit=50
0.391 | 0.116 | search_minus_done; http://172.18.8.135:50400/match?q=GCGTAGCCATAGTCGTAGGG&k=0&no_gap=0&offset=0&limit=21
0.392 | 0.001 | cgi_end;

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