GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:36:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-1293 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w9f7 5', mRNA sequence.
DV664220.1:51-71
ACGAGCTCCTTCCATCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCTCTCAA
CGN-10090 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w9f7 5', mRNA sequence.
DV673850.1:51-71
ACGAGCTCCTTCCATCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCTCTCAA
CGN-40125 Leaf Coffea canephora cDNA clone cccl31b15 5', mRNA sequence.
DV695307.1:69-89
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC69CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-50909 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w6e10 5', mRNA sequence.
DV704185.1:67-87
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC67CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-54148 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w16i23 5', mRNA sequence.
DV706659.1:70-90
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC70CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-54300 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w7n6 5', mRNA sequence.
DV706774.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-54498 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w4h7 5', mRNA sequence.
DV706930.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-54643 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w3g24 5', mRNA sequence.
DV707043.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-58242 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w19c17 5', mRNA sequence.
DV709838.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-58508 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w20p5 5', mRNA sequence.
DV710056.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-58894 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w23e16 5', mRNA sequence.
DV710370.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-59104 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w23p8 5', mRNA sequence.
DV710544.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-59389 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w28n11 5', mRNA sequence.
DV710775.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-60614 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30m7 5', mRNA sequence.
DV711746.1:67-87
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC67CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-60792 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w29n15 5', mRNA sequence.
DV711878.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-60981 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30i11 5', mRNA sequence.
DV712031.1:67-87
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC67CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-61961 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w24e7 5', mRNA sequence.
DV712814.1:51-71
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CGN-62513 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w14e10 5', mRNA sequence.
DV713289.1:67-87
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC67CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CC-F01_009_F13 Cherry of different development stage Coffea canephora cDNA clone CC-F01_009_F13, mRNA sequence.
EE197524.1:67-87
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC67CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCCCAAGAAT
CC-F01_010_E22 Cherry of different development stage Coffea canephora cDNA clone CC-F01_010_E22, mRNA sequence.
EE197785.1:67-87
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC67CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCCCAAGAAT
CC00-XX-EC1-056-D06-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-056-D06-EC, mRNA sequence.
GT654212.1:69-89
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC69CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CC00-XX-EC1-053-B03-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-053-B03-EC, mRNA sequence.
GT654213.1:51-71
ACGAGCTCCTTCCATCCCACTTCAGCTCTC51CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCTCAAGA
CC00-XX-EC1-077-G08-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-077-G08-EC, mRNA sequence.
GT654214.1:62-82
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC62CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CC00-XX-EC1-075-F09-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-075-F09-EC, mRNA sequence.
GT654215.1:69-89
ACGAGCTCCTTCCATCCCACTTCAGCTCTC69CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCTCAAGA
CA00-XX-CS1-019-D07-AC.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-019-D07-AC, mRNA sequence.
GT725011.1:70-90
ACGAGCTCCTTCCGTCCCACTTCAGCTCTC70CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT
CA00-XX-CS1-059-F05-SB.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-059-F05-SB, mRNA sequence.
GT725012.1:30-50
ACGAGCTCCTTCCGTCCCCTTCAGCTCTC30CCCTCAATCTCGTCCCCCTCTCCTTTTTCTCTCTCTCTCTCTCTCAAGAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTCAATCTCGTCCCCCTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTCAATCTCGTCCCCCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.565 | 1.556 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTCAATCTCGTCCCCCTCT&k=0&no_gap=0&offset=0&limit=50
1.677 | 0.112 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGGGGGACGAGATTGAGGG&k=0&no_gap=0&offset=0&limit=24
1.677 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).