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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:24:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CA00-XX-BP1-008-F03-JM.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-008-F03-JM, mRNA sequence.
GW453236.1:104-130
CCCCAGCATTCTCACGAAAACTCCAAAGTA104CCCTCCATAAATCTTCTTCACGTACTCGGGATCATCTGCACACAGCAGAACCCCAAA
CGN-1293 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w9f7 5', mRNA sequence.
DV664220.1:181-207
TTTGGGGTTCTGCTGTGTGCAGATGATCCC181GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-10090 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w9f7 5', mRNA sequence.
DV673850.1:181-207
TTTGGGGTTCTGCTGTGTGCAGATGATCCC181GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-40125 Leaf Coffea canephora cDNA clone cccl31b15 5', mRNA sequence.
DV695307.1:195-221
TTTGGGGTTCTGCTGTGTGCAGATGATCCC195GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-44053 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w19g16 5', mRNA sequence.
DV698413.1:12-38
CAGATGATCCC12GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-50909 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w6e10 5', mRNA sequence.
DV704185.1:193-219
TTTGGGGTTCTGCTGTGTGCAGATGATCCC193GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-54148 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w16i23 5', mRNA sequence.
DV706659.1:196-222
TTTGGGGTTCTGCTGTGTGCAGATGATCCC196GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-54300 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w7n6 5', mRNA sequence.
DV706774.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-54498 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w4h7 5', mRNA sequence.
DV706930.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-54643 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w3g24 5', mRNA sequence.
DV707043.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-58242 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w19c17 5', mRNA sequence.
DV709838.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-58508 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w20p5 5', mRNA sequence.
DV710056.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-58894 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w23e16 5', mRNA sequence.
DV710370.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-59104 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w23p8 5', mRNA sequence.
DV710544.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-59389 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w28n11 5', mRNA sequence.
DV710775.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-60614 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30m7 5', mRNA sequence.
DV711746.1:193-219
TTTGGGGTTCTGCTGTGTGCAGATGATCCC193GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-60792 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w29n15 5', mRNA sequence.
DV711878.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-60981 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w30i11 5', mRNA sequence.
DV712031.1:193-219
TTTGGGGTTCTGCTGTGTGCAGATGATCCC193GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-61961 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w24e7 5', mRNA sequence.
DV712814.1:177-203
TTTGGGGTTCTGCTGTGTGCAGATGATCCC177GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CGN-62513 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w14e10 5', mRNA sequence.
DV713289.1:193-219
TTTGGGGTTCTGCTGTGTGCAGATGATCCC193GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CC-L01_038_E05 Coffea young leaves Coffea canephora cDNA clone CC-L01_038_E05, mRNA sequence.
EE194435.1:36-62
TTTGGGGTTCTGCTGTGTGCAGATGATCCC36GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CC-F01_009_F13 Cherry of different development stage Coffea canephora cDNA clone CC-F01_009_F13, mRNA sequence.
EE197524.1:193-219
TTTGGGGTTCTGCTGTGTGCAGATGATCCC193GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CC-F01_010_E22 Cherry of different development stage Coffea canephora cDNA clone CC-F01_010_E22, mRNA sequence.
EE197785.1:193-219
TTTGGGGTTCTGCTGTGTGCAGATGATCCC193GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
TransId-220833 CACATN1 Coffea arabica cDNA clone CACATN1-6I43TV similar to Glutamine amidotransferase class-I - Medicago truncatula (Barrel medic), mRNA sequence.
GR996848.1:212-238
TTTGGGGTTCTGCTGTGTGCAGATGATCCC212GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
TransId-273265 CarCatLeEnri2 Coffea arabica cDNA clone CarCatLeEnri2_52-C06-PAL17d similar to Glutamine amidotransferase class-I - Medicago truncatula (Barrel medic), mRNA sequence.
GT018101.1:218-244
TTTGGGGTTCTGCTGTGTGCAGATGATCCC218GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CC00-XX-EC1-053-B03-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-053-B03-EC, mRNA sequence.
GT654213.1:179-205
TTTGGGGTTCTGCTGTGTGCAGATGATCCC179GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CC00-XX-EC1-077-G08-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-077-G08-EC, mRNA sequence.
GT654214.1:188-214
TTTGGGGTTCTGCTGTGTGCAGATGATCCC188GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CC00-XX-EC1-075-F09-EC.F Coffea canephora EC1 Coffea canephora cDNA clone CC00-XX-EC1-075-F09-EC, mRNA sequence.
GT654215.1:197-223
TTTGGGGTTCTGCTGTGTGCAGATGATCCC197GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CA00-XX-PA1-022-F03-EC.F Coffea arabica PA1 Coffea arabica cDNA clone CA00-XX-PA1-022-F03-EC, mRNA sequence.
GT684193.1:178-204
TTTGGGGTTCTGCTGTGTGCAGATGATCCC178GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CA00-XX-RM1-033-A08-EP.F Coffea arabica RM1 Coffea arabica cDNA clone CA00-XX-RM1-033-A08-EP, mRNA sequence.
GT710523.1:197-223
TTTGGGGTTCTGCTGTGTGCAGATGATCCC197GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CA00-XX-CS1-019-D07-AC.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-019-D07-AC, mRNA sequence.
GT725011.1:196-222
TTTGGGGTTCTGCTGTGTGCAGATGATCCC196GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CA00-XX-CS1-059-F05-SB.F Coffea arabica CS1 Coffea arabica cDNA clone CA00-XX-CS1-059-F05-SB, mRNA sequence.
GT725012.1:156-182
TTTGGGGTTCTGCTGTGTGCAGATGATCCC156GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CA00-XX-EA1-053-D03-EC.F Coffea arabica EA1 Coffea arabica cDNA clone CA00-XX-EA1-053-D03-EC, mRNA sequence.
GT726482.1:191-217
TTGGGGTTCTGCTGCGGTGCAGATGATCCC191GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG
CA00-XX-EA1-007-H08-EC.F Coffea arabica EA1 Coffea arabica cDNA clone CA00-XX-EA1-007-H08-EC, mRNA sequence.
GT726984.1:10-36
GATGATCCC10GAGTACGTGAAGAAGATTTATGGAGGGTACTTTGGAGTTTTCGTGAGAATGCTGGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTCCATAAATCTTCTTCACGTACTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTCCATAAATCTTCTTCACGTACTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.290 | 0.282 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTCCATAAATCTTCTTCACGTACTC&k=0&no_gap=0&offset=0&limit=50
2.119 | 1.828 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTACGTGAAGAAGATTTATGGAGGG&k=0&no_gap=0&offset=0&limit=49
2.140 | 0.021 | cgi_end;

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