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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 22:28:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Mus musculus chromosome 5, clone RP23-362I3, complete sequence.
AC137947.12:40028-40047
TGCCTGACTCACTCTAAAAGGGGCTGCTTG40028CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Acomys percivali genome assembly, chromosome: 7.
OU015748.1:51579-51598
TGGTCATTCTGTCAGTCTCCCTCCCTCCCT51579CCCTCCTCCTCTTGCTCTCTCTTGCTCTCTCTCGCTCTAGCTCTTGCTCT
Mus musculus genome assembly, chromosome: 5.
OW971569.1:100306903-100306922
TGCCTGACTCACTCTAAAAGGGGCTGCTTG100306903CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OW971578.1:101050937-101050956
TGCCTGACTCACTCTAAAAGGGGCTGCTTG101050937CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OW971598.1:99658735-99658754
TGCCTGACTCACTCTAAAAGGGGCTGCTTG99658735CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGCCCTCTGCCCCTTCCCT
Mus musculus domesticus genome assembly, chromosome: 5.
OW971634.1:102690538-102690557
TGCCTGACTCACTCTAAAAGGGGCTGCTTG102690538CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGCCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OW971642.1:100262088-100262107
TGCCTGACTCACTCTAAAAGGGGCTGCTTG100262088CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus molossinus genome assembly, chromosome: 5.
OW971662.1:107013661-107013680
TGCCTGACTCACTCGAAAAGGGGCTGCTTG107013661CCCTCCTCCTCTTGCTCTCTTGCGGCCTCTCTGTCCTCTGCCCCTTCTCT
Mus musculus genome assembly, chromosome: 5.
OW971713.1:99979685-99979704
TGCCTGACTCACTCTAAAAGGGGCTGCTTG99979685CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OW971726.1:100640125-100640144
TGCCTGACTCACTCTAAAAGGGGCTGCTTG100640125CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGCCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OW971746.1:100109963-100109982
TGCCTGACTCACTCTAAAAGGGGCTGCTTG100109963CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus musculus genome assembly, chromosome: 5.
OW971768.1:99018616-99018635
TGCCTGACTCACTCGAAAAGGGGCTGCTTG99018616CCCTCCTCCTCTTGCTCTCTTGCGGCCTCTCTGTCCTCTGCCCCTTCTCT
Mus musculus genome assembly, chromosome: 5.
OW971788.1:99975920-99975939
TACCTGACTCACTCTAAAAGGGGCTGCTTG99975920CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OW971809.1:103964204-103964223
TACCTGACTCACTCTAAAAGGGGCTGCTTG103964204CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus castaneus genome assembly, chromosome: 5.
OW971839.1:99528788-99528807
TGCCTGACTTACTCGAAAAGGGGCTGCTTG99528788CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OW971857.1:102293345-102293364
TGCCTGACTCACTCTAAAAGGGGCTGCTTG102293345CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Heterocephalus glaber genome assembly, chromosome: 20.
OX090960.1:50353125-50353144
CCCAATTTGCTTCAATCTTCCCCTTCCCTC50353125CCCTCCTCCTCTTGCTCTCTCTTTTTAAAAAATATGTTTTATAATTTTTG
Mus musculus genome assembly, chromosome: 5.
OX389799.1:115803082-115803101
TGCCTGACTCACTCTAAAAGGGGCTGCTTG115803082CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGCCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OX390149.1:108181363-108181382
TGCCTGACTCACTCTAAAAGGGGCTGCTTG108181363CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGCCCTCTGCCCCTTCCCT
Mus musculus genome assembly, chromosome: 5.
OX439019.1:106788090-106788109
TGCCTGACTCACTCTAAAAGGGGCTGCTTG106788090CCCTCCTCCTCTTGCTCTCTTGCCGCCTCTCTGTCCTCTGCCCCTTCCCT
Muscardinus avellanarius genome assembly, chromosome: 1.
OY726557.1:30618624-30618643
AGGGATGTGGCCTTGGGGATTATATATGGT30618624CCCTCCTCCTCTTGCTCTCTCTTTTGCTTCTGGCCTTTGTGAGGTAAGAG
Muscardinus avellanarius genome assembly, chromosome: 14.
OY726571.1:39951304-39951323
ACTGGACAAAAGACAACCTTTTTTTTCCCC39951304CCCTCCTCCTCTTGCTCTCTCCTGCTTCTAGCTTCTGAGATGTGAAAGCA
Heterocephalus glaber genome assembly, chromosome: 18.
OZ001083.1:13305877-13305896
CCCAATTTGCTTCAATCTTCCCCTTCCCTC13305877CCCTCCTCCTCTTGCTCTCTCTTTTTAAAAAATATGTTTTATAATTTTTG
Heterocephalus glaber genome assembly, chromosome: 18.
OZ001126.1:15068175-15068194
CCCAATTTGCTTCAATCTTCCCCTTCCCTC15068175CCCTCCTCCTCTTGCTCTCTCTTTTTAAAAAATATGTTTTATAATTTTTG
Micromys minutus genome assembly, chromosome: 11.
OZ004791.1:40270077-40270096
ATCCAGTCAAGGCCCCCAGCTCATTCATTT40270077CCCTCCTCCTCTTGCTCTCTGCAGTGATGGGGATGGAACCCAAGACCTTG
Micromys minutus genome assembly, chromosome: 19.
OZ004799.1:39948378-39948397
GGGAAGGGGAAGAAGCCCTCCTACCACTGC39948378CCCTCCTCCTCTTGCTCTCTGTCCCCCTTTTCTCTTCCTCCTGTCTCCTG
Felis catus Senzu DNA, chromosome: A1, American Shorthair breed.
AP023152.1:152167700-152167719
ACTTGGGATTCTCTCTCCCTCTCTCTCTGC152167700CCCTCCTCCTCTTGCTCTCTTTCCCTCTCTCTGTCTCTCTTTCAAAATAA
Felis catus Senzu DNA, chromosome: A1, American Shorthair breed.
AP023152.1:152547491-152547510
ACTTGGGATTCTCTCTCCCTCTCTCTCTGC152547491CCCTCCTCCTCTTGCTCTCTTTCCCTCTCTCTGTCTCTCTTTCAAAATAA
Felis catus Senzu DNA, chromosome: C1, American Shorthair breed.
AP023159.1:40942451-40942470
ACTTAGGATCCTCTGTCCCCCTCTCCCTGC40942451CCCTCCTCCTCTTGCTCTCTTTCAAAAATAAAATAAACATTTTAAAAAAA
Felis catus Senzu DNA, chromosome: C2, American Shorthair breed.
AP023160.1:98385220-98385239
CTGCTTAGGATTCTGTCTCTCCCTCTCTGC98385220CCCTCCTCCTCTTGCTCTCTCTGCCTCTCTCTCAAAAATAAACTTAAAAC
Sus scrofa scrofa breed NS chromosome 5.
CP071556.1:16511469-16511488
TTTTAATCTCTGCCTAGGGCCCAGTTTCTC16511469CCCTCCTCCTCTTGCTCTCTGCCTTTTTCTGTCTCTCAATCTCCGTTTTC
Stenella coeruleoalba genome assembly, chromosome: 4.
OX596388.1:136025139-136025158
CCTCACTGTGCACAACTCCCACCCTCCGCT136025139CCCTCCTCCTCTTGCTCTCTCTTCCTCTCCCTCCGCCCGCCCCCCGCCCC
Plecotus auritus genome assembly, chromosome: 2.
OY734023.1:146183856-146183875
CATTCCTCTCTCCTTCCAGGCCTGTTCTCT146183856CCCTCCTCCTCTTGCTCTCTCTCCTCCCCCTTTCCCTTTATTATCTCTTG
Sus scrofa genome assembly, chromosome: 5.
OY997212.1:18020314-18020333
TTTTAATCTCTGCCTAGGGCCCAGTTTCTC18020314CCCTCCTCCTCTTGCTCTCTGCCTTTTTCTGTCTCTCAATCTCCGTTTTC
Sciaenops ocellatus chromosome 10.
CP136875.1:5779278-5779297
AGAAGTTCATGTACAAAGAAACATTGAACC5779278CCCTCCTCCTCTTGCTCTCTAACAGCTGAGGTTATTATTGGAAAGACTCT
Sparus aurata genome assembly, chromosome: 6.
LR537126.1:9346581-9346600
ACTGGGGAACCCCTACCATATACCTCCCTC9346581CCCTCCTCCTCTTGCTCTCTCTCCTTGTCTTTATCTCTGTCTCTCTCCTT
Coregonus sp. 'balchen' genome assembly, chromosome: 2.
LR778254.1:5736428-5736447
CCAATCTTCCTCCCGTCTCTGTCTCTCTCT5736428CCCTCCTCCTCTTGCTCTCTTCTCCCCCTACCTTCCTCCCTCTCTCCTGT
Coregonus sp. 'balchen' genome assembly, chromosome: 5.
LR778257.1:18645884-18645903
AATTTGTCCTCATTGTTGTCCCCTGCCTCT18645884CCCTCCTCCTCTTGCTCTCTGTCAATTGTTGGCATCCATTATTCAAAACA
Acanthopagrus latus isolate v.2019 genome assembly, chromosome: 6.
LR884465.1:6463426-6463445
ACTGGGGAACACCTACCATATACCTCCCTC6463426CCCTCCTCCTCTTGCTCTCTCTCTCCTTGTCTTTATCTCTGTCTCTCTCC
Astatotilapia calliptera genome assembly, chromosome: 7.
LS420025.2:65861805-65861824
CTGACAGGTTTCTTGTCACCAGGGGGGTTT65861805CCCTCCTCCTCTTGCTCTCTTTCTCTCTGACCACACACACACACACACAC
Pholis gunnellus genome assembly, chromosome: 15.
OU342818.1:22565143-22565162
CTCATCTTCTGCAGACCTCCGGCCTCTCAT22565143CCCTCCTCCTCTTGCTCTCTCTCTCTCTCTCTCTCTCTCTGTCGCTCTCT
Acipenser ruthenus genome assembly, chromosome: 6.
OV737687.1:11823853-11823872
CGCACGTACCGAGTGTCCTGGCGTGGCTCA11823853CCCTCCTCCTCTTGCTCTCTTTCAACAGGTGTCCCCCAAGGCTCAGACCT
Acipenser ruthenus genome assembly, chromosome: 6.
OV754675.1:11769730-11769749
CGCACGTACCGAGTGTCCTGGCGTGGCTCA11769730CCCTCCTCCTCTTGCTCTCTTTCAACAGGTGTCCCCCAAGGCTCAGACCT
Silurus aristotelis genome assembly, chromosome: 21.
OX327773.1:20822419-20822438
TCCCCCTCCTCCCCCTCCCCCCCCTCCTCC20822419CCCTCCTCCTCTTGCTCTCTGTTTGTTAGCATCCATTGTTCAAAACAGGT
Argyrosomus regius genome assembly, chromosome: 12.
OX336893.1:18086638-18086657
TTTTCCTCCACTTTTTTTTTTGCCTCTTTC18086638CCCTCCTCCTCTTGCTCTCTTGCCATTTTCCACATGGCGGAGCAGGGAAT
Barbatula barbatula genome assembly, chromosome: 16.
OX344783.1:10178130-10178149
CTCGCCCTGTCTCACGCTCTCTCTCTCTCT10178130CCCTCCTCCTCTTGCTCTCTCTGCAATAACAGTGCTGACCTAGTTTCAGT
Vipera ursinii genome assembly, chromosome: 3.
OX365966.1:51384556-51384575
GGCGGGGGCTGACTCCTATTCTCCTTCCCT51384556CCCTCCTCCTCTTGCTCTCTTTCCAAGTTTCTGCTCCTCCCTCTTTCTCA
Pungitius pungitius genome assembly, chromosome: 2.
OX438542.1:18957999-18958018
ATTTTTTCTTCTTTTTTTTTGGCCTCCATC18957999CCCTCCTCCTCTTGCTCTCTTGCCATTTTCCACATGGAGGAGCAGCGAAT
Notothenia rossii genome assembly, chromosome: 8.
OX449118.1:66959583-66959602
TCAAATCTAGCACTTGAACACAGCATGTAA66959583CCCTCCTCCTCTTGCTCTCTTCAGACGCCTGTCACCTATTGTGCAGCCAA
Pollachius pollachius genome assembly, chromosome: 17.
OX465140.1:21042274-21042293
ATTCACACCTCCTAATAGACACTCGCGTTT21042274CCCTCCTCCTCTTGCTCTCTCTCTCAATATTTCTGTGGAAAGTGACTCTG
Podarcis cretensis genome assembly, chromosome: 2.
OX638150.1:44204649-44204668
AGCTGCTCGGTGCCTCCTCCCTCCCTCCCT44204649CCCTCCTCCTCTTGCTCTCTGTCTCTCCTCCCCTCCCTCCCTCCCTCCTC
Nesoenas mayeri genome assembly, chromosome: 5.
OY720061.1:51783730-51783749
CTATTTCCTCCACTTTTGTACCCTATATCG51783730CCCTCCTCCTCTTGCTCTCTCTAGGTGTCTGTTGTCTCTTTGGCTGGGTG
Cyclopterus lumpus genome assembly, chromosome: 22.
OY735169.1:5682303-5682322
TTTCTTTCCTGTCTGTCTCACCTCTCCGTA5682303CCCTCCTCCTCTTGCTCTCTCATCTCCTCGCTCCTCTGTTCTTGTCAGGC
Conger conger genome assembly, chromosome: 2.
OY741315.1:61052575-61052594
GGAAATTACTTTAGCACAAATGGTGTTGAT61052575CCCTCCTCCTCTTGCTCTCTCTCTCAGCCGGTCACGGATACAGAGAAAGT
Neolamprologus multifasciatus genome assembly, chromosome: 7.
OY755016.1:69687876-69687895
GTGCTGACAGGTTTGTCACCAGGGGGGTTT69687876CCCTCCTCCTCTTGCTCTCTTTCTCTCTGACACACACACAGACTCACACA
Sardina pilchardus genome assembly, chromosome: 15.
OY974100.1:20404499-20404518
TTGGGGCCCTGGGGCCGATGGCCTCGCATC20404499CCCTCCTCCTCTTGCTCTCTTTCTCTCTTCCTCCGTTCTGTCTGTTTTTT
Protomyctophum bolini genome assembly, chromosome: 14.
OZ001279.1:25777819-25777838
GCCTTCTGCTCCTTTCCTCTCTCCACTCCT25777819CCCTCCTCCTCTTGCTCTCTTCTTTCAGCCCCTTCTCTCCCTGCTCGAGC
Protomyctophum bolini genome assembly, chromosome: 19.
OZ001284.1:22216711-22216730
GCTGAAGAAGTCTGGCCTTTGAATAGCCCC22216711CCCTCCTCCTCTTGCTCTCTCCTCCCTCTCCCTCCTCCCTGCTGCCTCTA
Sequence 3005 from patent US 11667974.
OT103539.1:14565-14584
GCCTTGATAATGCTTTTGTGAAATCTTTTT14565CCCTCCTCCTCTTGCTCTCTTTGAAAGTTGTAATGAAAATTCCGGGCTCT
Homo sapiens cDNA clone BRACE2024212, 5' end, mRNA sequence.
DA073078.1:63-82
GCCTTGATAATGCTTTTGTGAAATCTTTTT63CCCTCCTCCTCTTGCTCTCTTTGAAAGTTGTAATGAAAATTCCGGGCTCT
Sus scrofa genomic clone CH242-129J13, genomic survey sequence.
CT169838.1:256-275
GTGTGCAGAGAGATTCCTATGTTGGTCTTC256CCCTCCTCCTCTTGCTCTCTTCAACAATGGTGTCTTGCTTCTCCTGTGGG
Homo sapiens chromosome 1 clone RP11-126I6, WORKING DRAFT SEQUENCE, 33 unordered pieces.
AC034143.3:60922-60941
GCCTTGATAATGCTTTTGTGAAATCTTTTT60922CCCTCCTCCTCTTGCTCTCTTTGAAAGTTGTAATGAAAATTCCGGGCTCT
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-123B14.
CU457393.2:68992-69011
TTTTAATCTCTGCCTAGGGCCCAGTTTCTC68992CCCTCCTCCTCTTGCTCTCTGCCTTTTTCTGTCTCTCAATCTCCGTTTTC
Pig DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH242-274A14.
CU633692.2:35894-35913
GCACAGAGAAAGATATTATGTCAGTCCTGC35894CCCTCCTCCTCTTGCTCTCTCCAACAGTGGCGCCTTGCTTCTCCTGCAGG
Brassica rapa subsp. pekinensis clone KBrH028G06, complete sequence.
CU695294.1:107164-107183
TTCTCCTCGTCCTCGCAATCCCGTTTCTCT107164CCCTCCTCCTCTTGCTCTCTCTATCTACACTCAATCTTGATCCTCCTCCC
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:1658640-1658659
TTCTCCTCGTCCTCGCAATCCCGTTTCTCT1658640CCCTCCTCCTCTTGCTCTCTCTATCTACACTCAATCTTGATCCTCCTCCC
Musa acuminata subsp. malaccensis isolate AA chromosome 10.
CP126379.1:39049626-39049645
TCTTCCCCCTCCGGCACCACCGCACGTCCT39049626CCCTCCTCCTCTTGCTCTCTCCCCGCTCCACTTTCACCCTCGCCCACAAC
Musa acuminata subsp. malaccensis isolate AA chromosome 21.
CP126390.1:42775381-42775400
TCTTCCCCCTCCGGCACCACCGCACGTCCT42775381CCCTCCTCCTCTTGCTCTCTCCCCGCTCCACTTTCACCCTCGCCCACAAC
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A10.
HG996476.1:36232557-36232576
TGTTCCTCCTCCGGCACCACCGCACGTCCT36232557CCCTCCTCCTCTTGCTCTCTCCCCGCTCCACTTCCACCCTCGCCCACAAC
Musa schizocarpa genome assembly, chromosome: S10.
LS990924.1:40230315-40230334
TCTTCTTCCTCCGGCACCACCGCACGTCCT40230315CCCTCCTCCTCTTGCTCTCTCCCCGCTCCACTTCCACCCTCGCCCACAAC
Hedera helix genome assembly, chromosome: 15.
OX359278.1:36606683-36606702
CGTCTTTTGATCCTTTTCTGTGTTCTCACT36606683CCCTCCTCCTCTTGCTCTCTTCTTTCTTCGTTTTGCTGCTTTTTAGCTTA
Hedera helix genome assembly, chromosome: 15.
OX359278.1:36627094-36627113
CGTCTTTTGATCCTTTTCTGTGTTCTCACT36627094CCCTCCTCCTCTTGCTCTCTTCTTTCTTCGTTCTGCTGCTTTTTAGCTTA
Geranium rotundifolium genome assembly, chromosome: 10.
OY987320.1:2570888-2570907
TCTTCATGCTTGGCCGAGACCTCCAAGGAC2570888CCCTCCTCCTCTTGCTCTCTCTTCTATTCTAGTAAGGTAGAAGAGTGTAG
Ectemnius continuus genome assembly, chromosome: 9.
OU342864.1:5575083-5575102
CCAACCGAGCGCCGCCCCTCCCCCTCCTCC5575083CCCTCCTCCTCTTGCTCTCTCTGCCTTGAAATCCCATGGTCGTTCATTGT
Platycnemis pennipes genome assembly, chromosome: 2.
OW121848.1:98931120-98931139
CACCCTAGAACATTCCTGATCTCCTAACCC98931120CCCTCCTCCTCTTGCTCTCTCCCTCTCTCTCTATACCTTTCCTGTCCCGC
Heterobilharzia americana genome assembly, chromosome: Z.
OX104134.1:40546683-40546702
CGCCTAAACAACTGATTAAATGGCCTAACT40546683CCCTCCTCCTCTTGCTCTCTTCTATGCACAAACGAATCTATAGGTTTCAA
Netelia dilatata genome assembly, chromosome: 4.
OX328014.1:3942045-3942064
GTGGCAAACGAGATGCTGATCGATCGATCA3942045CCCTCCTCCTCTTGCTCTCTCACTCCCCTGCGATAAGTGGCAAGATATAT
Agelas oroides genome assembly, chromosome: 6.
OX422188.1:3740883-3740902
TCCTCTCCCTCCTCCTCTCACTCTTCCTCT3740883CCCTCCTCCTCTTGCTCTCTTCCTCTGCTCTTCCTCATGCTCTCTTCCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTCCTCCTCTTGCTCTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTCCTCCTCTTGCTCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.534 | 0.526 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTCCTCCTCTTGCTCTCT&k=0&no_gap=0&offset=0&limit=50
0.702 | 0.167 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGAGCAAGAGGAGGAGGG&k=0&no_gap=0&offset=0&limit=0
0.702 | 0.000 | cgi_end;

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