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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-11 20:42:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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USDA-FP_119000-307 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_B08 5', mRNA sequence.
CF503820.1:159-178
TTGCTCATTCTTACATGGATGATGTTATTG159CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
USDA-FP_123000-713 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-65_D02 5', mRNA sequence.
CF508212.1:402-421
TTGCTCATTCTTACATGGATGATGTTATTG402CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CGF1004480_H03 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0001_IIF_H03 5', mRNA sequence.
CK937871.1:421-440
TTGCTCATTCTTACATGGATGATGTTATTG421CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CGF1004439_H04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_H04 5', mRNA sequence.
CK938672.1:416-435
TTGCTCATTCTTACATGGATGATGTTATTG416CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CGF1004749_F11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_F11 5', mRNA sequence.
CK939503.1:197-216
TTGCTCATTCTTACATGGATGATGTTATTG197CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
UCRPT01_0006F09_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0006F09, mRNA sequence.
CV705072.1:398-417
TTGCTCATTCTTACATGGATGATGTTATTG398CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
C01002C09Rv Veg1 Citrus clementina cDNA clone C01002C09, mRNA sequence.
CX286895.1:388-407
TTGCTCATTCTTACATGGATGATGTTATTG388CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
UCRPT01_5_009_D04_T7 Poncirus trifoliata CTV-challenged cDNA library - UCRPT01-UCR2 Citrus trifoliata cDNA clone UCRPT01_009_T7_D04, mRNA sequence.
CX543818.1:388-407
TTGCTCATTCTTACATGGATGATGTTATTG388CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
UCRCS11_01K02_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001K02, mRNA sequence.
DN617743.1:403-422
TTGCTCATTCTTACATGGATGATGTTATTG403CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
UCRCS11_03M13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003M13, mRNA sequence.
DN619333.1:398-417
TTGCTCATTCTTACATGGATGATGTTATTG398CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
UCRCS11_05L10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0005L10, mRNA sequence.
DN620715.1:400-419
TTGCTCATTCTTACATGGATGATGTTATTG400CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
USDA-FP/ARO_13737 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-04_H09 5', mRNA sequence.
DN957907.1:397-416
TTGCTCATTCTTACATGGATGATGTTATTG397CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
USDA-FP/ARO_16058 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-37_A08 5', mRNA sequence.
DN960228.1:22-41
CTTACATGGATGATGTTATTG22CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
KN0AAP4YE03FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261860.1:403-422
TTGCTCATTCTTACATGGATGATGTTATTG403CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
IC0AAA26CG07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269343.1:400-419
TTGCTCATTCTTACATGGATGATGTTATTG400CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
IC0AAA27DC02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY269748.1:400-419
TTGCTCATTCTTACATGGATGATGTTATTG400CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
IC0AAA63AC04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY285055.1:400-419
TTGCTCATTCTTACATGGATGATGTTATTG400CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
IC0AAA97CE08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY299175.1:406-425
TTGCTCATTCTTACATGGATGATGTTATTG406CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C1-100-037-E10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY652823.1:418-437
TTGCTCATTCTTACATGGATGATGTTATTG418CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C1-100-051-H02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY654108.1:361-380
TTGCTCATTCTTACATGGATGATGTTATTG361CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C1-101-028-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY660979.1:332-351
TTGCTCATTCTTACATGGATGATGTTATTG332CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C1-102-023-D11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY666733.1:430-449
TTGCTCATTCTTACATGGATGATGTTATTG430CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C1-102-079-A11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY670762.1:364-383
TTGCTCATTCTTACATGGATGATGTTATTG364CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C1-102-077-G10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY673418.1:317-336
TTGCTCATTCTTACATGGATGATGTTATTG317CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C3-701-085-D04-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY708636.1:409-428
TTGCTCATTCTTACATGGATGATGTTATTG409CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C3-701-022-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY709936.1:202-221
TTGCTCATTCTTACATGGATGATGTTATTG202CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C3-702-034-H01-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
EY713779.1:410-429
TTGCTCATTCTTACATGGATGATGTTATTG410CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CS00-C5-003-050-F05-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY753065.1:210-229
TTGCTCATTCTTACATGGATGATGTTATTG210CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CR05-C1-100-053-G12-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY762394.1:409-428
TTGCTCATTCTTACATGGATGATGTTATTG409CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
CR05-C1-100-071-G08-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY763712.1:409-428
TTGCTCATTCTTACATGGATGATGTTATTG409CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
CR05-C1-102-058-E04-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY772007.1:392-411
TTGCTCATTCTTACATGGATGATGTTATTG392CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
CR05-C1-102-058-E07-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus reticulata cDNA, mRNA sequence.
EY772010.1:392-411
TTGCTCATTCTTACATGGATGATGTTATTG392CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
CR05-C1-103-100-D07-CT.F Mandarin leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus reticulata cDNA, mRNA sequence.
EY783369.1:406-425
TTGCTCATTCTTACATGGATGATGTTATTG406CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
CR05-C3-701-021-E07-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY794570.1:212-231
TTGCTCATTCTTACATGGATGATGTTATTG212CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CR05-C3-702-095-A02-CT.F Mandarin fruit, development stadium (3 of 3) Citrus reticulata cDNA, mRNA sequence.
EY809613.1:112-131
TTGCTCATTCTTACATGGATGATGTTATTG112CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
CA26-C1-002-076-H05-CT.F Sour orange leaf, field plant Citrus aurantium cDNA, mRNA sequence.
EY848380.1:224-243
TTGCTCATTCTTACATGGATGATGTTATTG224CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
C31103H11EF AbioticR1 Citrus reshni cDNA clone C31103H11, mRNA sequence.
FC869666.1:420-439
TTGCTCATTCTTACATGGATGATGTTATTG420CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
IC0AAA26CG07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA26CG07, mRNA sequence.
FC887787.1:400-419
TTGCTCATTCTTACATGGATGATGTTATTG400CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
IC0AAA63AC04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA63AC04, mRNA sequence.
FC893272.1:400-419
TTGCTCATTCTTACATGGATGATGTTATTG400CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
IC0AAA97CE08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA97CE08, mRNA sequence.
FC910129.1:406-425
TTGCTCATTCTTACATGGATGATGTTATTG406CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
IC0AAA27DC02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA27DC02, mRNA sequence.
FC915593.1:400-419
TTGCTCATTCTTACATGGATGATGTTATTG400CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
KN0AAP4YE03FM1 TF Citrus clementina cDNA clone KN0AAP4YE03, mRNA sequence.
FC927664.1:403-422
TTGCTCATTCTTACATGGATGATGTTATTG403CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
Citrus sinensis vacuolar citrate/H+ symporter mRNA, complete cds.
EF028327.1:415-434
TTGCTCATTCTTACATGGATGATGTTATTG415CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTTGCCGTTGAGCACTACAAC
UNVERIFIED: Citrus reshni vacuolar citrate/H+ symporter-like gene, partial sequence.
JX630070.1:268-287
TTGCTCATTCTTACATGGATGATGTTATTG268CCCTCGTTCTTGGTAGCTTTATTCTTGCTCTCGCCGTTGAGCACTACAAC
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:31677658-31677677
GTTGTAGTGCTCAACGGCAAGAGCAAGAAT31677658AAAGCTACCAAGAACGAGGGCAATAACATCATCCATGTAAGAATGAGCAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTCGTTCTTGGTAGCTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTCGTTCTTGGTAGCTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
2.250 | 2.242 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTCGTTCTTGGTAGCTTT&k=0&no_gap=0&offset=0&limit=50
2.385 | 0.134 | search_minus_done; http://172.18.8.135:50400/match?q=AAAGCTACCAAGAACGAGGG&k=0&no_gap=0&offset=0&limit=6
2.385 | 0.001 | cgi_end;

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