GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 03:17:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
AP015044.1:7367355-7367374
CCCAACCCATTCCAGCCACCAAGCCCACCA7367355CCCTTCATCCCTAACCCATTCCAGCCTCCTCCAAGCCCACATGCACCCTT
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:661869916-661869935
AAAATAAAAAAGAAGTTGAAATCGTATGTT661869916CCCTTCATCCCTAACCCATTATTCAAATTTTCATTTCAATGATTTTCTAT
4_Tbi_b3v08.
OD564837.1:50730-50749
GCCACCCAGCGAGGAAGATCCAGCCCCTTT50730CCCTTCATCCCTAACCCATTATCAACGTCCCAAAATGTTAACATCTACTG
5_Tge_b3v08.
OE846072.1:7923-7942
CTACATTCCTCTAAATATAACCTTCCTCAT7923CCCTTCATCCCTAACCCATTAATGTAATTAGTACATAATCGTATGACCCG
Vigna angularis mRNA, clone: VES05H24.
HX944155.1:538-557
AAGGGTGCATGTGGGCTTGGAGGAGGCTGG538AATGGGTTAGGGATGAAGGGTGGTGGGCTTGGTGGCTGGAATGGGTTGGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCTTCATCCCTAACCCATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTTCATCCCTAACCCATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.245 | 0.237 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTTCATCCCTAACCCATT&k=0&no_gap=0&offset=0&limit=50
0.352 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=AATGGGTTAGGGATGAAGGG&k=0&no_gap=0&offset=0&limit=46
0.353 | 0.001 | cgi_end;

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