GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:00:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nannobrachium achirus genome assembly, chromosome: 13.
OY997650.1:33396435-33396455
GAGTTTGTCTGTCAATCCCCGCCCTCCTCA33396435GGTGGAGACTGAAAAGAAGGGGGCGGGACTAAGCATGGAGAGAACTGTGAA
Arachis hypogaea DNA, clone: AHGS42L23.
DH961586.1:557-577
AGAAAGAGGGGAGAAGACAATGGTAGTAGT557GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG
Arachis hypogaea DNA, clone: KICT07I10.
DH966673.1:174-194
AGAAAGAGGGGAGAAGACAATGGTAGTAGT174GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:9177053-9177073
AGAAAGAGGGGAGAAGACAATGGTAGTAGT9177053GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:9822823-9822843
AGAAAGAGGGGAGAAGACAATGGTAGTAGT9822823GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCTTCTTTTCAGTCTCCACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTTCTTTTCAGTCTCCACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTTCTTTTCAGTCTCCACC&k=0&no_gap=0&offset=0&limit=50
0.195 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGGAGACTGAAAAGAAGGG&k=0&no_gap=0&offset=0&limit=50
0.198 | 0.003 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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