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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-03 12:30:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Heterocephalus glaber genome assembly, chromosome: 10.
OX090918.1:41036101-41036119
AATTTCCAAGAAGGACCCCATGAAACATTT41036101CCCTTTCACCTTCACCTAGGAAACAAAGATTTCATTTAAAAAGTTCAGG
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001077.1:79065645-79065663
AATTTCCAAGAAGGACCCCATGAAACATTT79065645CCCTTTCACCTTCACCTAGGAAACAAAGATTTCATTTAAAAAGTTCAGG
Heterocephalus glaber genome assembly, chromosome: 12.
OZ001120.1:78527585-78527603
AATTTCCAAGAAGGACCCCATGAAACATTT78527585CCCTTTCACCTTCACCTAGGAAACAAAGATTTCATTTAAAAAGTTCAGG
Medicago truncatula EST MtBA14E11F1 : T3 end of clone MtBA14E11 of cDNA library MtBA from root tips of cultivar Jemalong of Medicago truncatula (barrel medic).
AL367374.1:98-116
GAAAATCAAGAACTAACACTGTACTTAGAT98CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF042G08IN1F1065 Insect herbivory Medicago truncatula cDNA clone NF042G08IN 5', mRNA sequence.
BE321371.2:127-145
GAAAATCAAGAACTAACACTGTACTTAGAT127CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST430856 GVSN Medicago truncatula cDNA clone pGVSN-15A18, mRNA sequence.
BE999133.1:90-108
GAAAATCAAGAACTAACACTGTACTTAGAT90CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF053B07PL1F1059 Phosphate starved leaf Medicago truncatula cDNA clone NF053B07PL 5', mRNA sequence.
BF638503.1:127-145
GAAAATCAAGAACTAACACTGTACTTAGAT127CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF032G01EC1F1006 Elicited cell culture Medicago truncatula cDNA clone NF032G01EC 5', mRNA sequence.
BF645685.1:127-145
GAAAATCAAGAACTAACACTGTACTTAGAT127CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF025G07EC1F1055 Elicited cell culture Medicago truncatula cDNA clone NF025G07EC 5', mRNA sequence.
BF648062.1:104-122
GAAAATCAAGAACTAACACTGTACTTAGAT104CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF109B04EC1F1031 Elicited cell culture Medicago truncatula cDNA clone NF109B04EC 5', mRNA sequence.
BF651000.1:110-128
GAAAATCAAGAACTAACACTGTACTTAGAT110CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST482505 GVN Medicago truncatula cDNA clone pGVN-62E17 5' end, mRNA sequence.
BG580777.1:28-46
AATCAAGAACTAACACTGTACTTAGAT28CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST508210 HOGA Medicago truncatula cDNA clone pHOGA-9A18 5' end, mRNA sequence.
BG646591.1:78-96
AAAATCAAGAAACTAACACTGTACTTAGAT78CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST509289 HOGA Medicago truncatula cDNA clone pHOGA-17H1 5' end, mRNA sequence.
BG647670.1:90-108
GAAAATCAAGAACTAACACTGTACTTAGAT90CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST590150 KV2 Medicago truncatula cDNA clone pKV2-52M22, mRNA sequence.
BM779574.1:28-46
AATCAAGAACTAACACTGTACTTAGAT28CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST592402 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-20H23, mRNA sequence.
BM814309.1:67-85
GAAAATCAAGAACTAACACTGTACTTAGAT67CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST592403 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-20H23, mRNA sequence.
BM814310.1:28-46
AATCAAGAACTAACACTGTACTTAGAT28CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST592425 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-20L21, mRNA sequence.
BM814332.1:123-141
GAAAATCAAGAACTAACACTGTACTTAGAT123CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST593353 BNIR Medicago truncatula/Meloidogyne incognita mixed EST library cDNA clone pBNIR-25K7, mRNA sequence.
BM815259.1:28-46
AATCAAGAACTAACACTGTACTTAGAT28CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF062F04FL1F1043 Developing flower Medicago truncatula cDNA clone NF062F04FL 5', mRNA sequence.
BQ148187.1:131-149
GAAAATCAAGAACTAACACTGTACTTAGAT131CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF039B11IR1F1092 Irradiated Medicago truncatula cDNA clone NF039B11IR 5', mRNA sequence.
BQ153493.1:127-145
GAAAATCAAGAACTAACACTGTACTTAGAT127CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF040B08IR1F1064 Irradiated Medicago truncatula cDNA clone NF040B08IR 5', mRNA sequence.
BQ153581.1:123-141
GAAAATCAAGAACTAACACTGTACTTAGAT123CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF056G07IR1F1055 Irradiated Medicago truncatula cDNA clone NF056G07IR 5', mRNA sequence.
BQ154219.1:127-145
GAAAATCAAGAACTAACACTGTACTTAGAT127CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF081F05IR1F1047 Irradiated Medicago truncatula cDNA clone NF081F05IR 5', mRNA sequence.
BQ155547.1:123-141
GAAAATCAAGAACTAACACTGTACTTAGAT123CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
NF093E08IR1F1067 Irradiated Medicago truncatula cDNA clone NF093E08IR 5', mRNA sequence.
BQ156494.1:128-146
GAAAATCAAGAACTAACACTGTACTTAGAT128CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
s13dSG03E0400023_113968 Glandular trichomes Medicago sativa cDNA, mRNA sequence.
CO512227.1:152-170
GAAAATCAAGAACCAACACTGTACTTAGAT152CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
s13dNF08F12AT095_447214 Aphid-Infected Shoots Medicago truncatula cDNA, mRNA sequence.
CX523935.1:136-154
GAAAATCAAGAACTAACACTGTACTTAGAT136CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
s13dNF45G05GS036_461218 Germinating Seed Medicago truncatula cDNA, mRNA sequence.
CX538979.1:128-146
GAAAATCAAGAACTAACACTGTACTTAGAT128CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
s13dNF69G06GS052_465322 Germinating Seed Medicago truncatula cDNA, mRNA sequence.
CX541018.1:128-146
GAAAATCAAGAACTAACACTGTACTTAGAT128CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
EST1225700 MTY Medicago truncatula cDNA clone MTYAL02, mRNA sequence.
DW016739.1:147-165
GAAAATCAAGAACTAACACTGTACTTAGAT147CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
MTYCD19TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV254774.1:139-157
GAAAATCAAGAACTAACACTGTACTTAGAT139CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
MTYCT87TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV256187.1:137-155
GAAAATCAAGAACTAACACTGTACTTAGAT137CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
MTYD119TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV256816.1:142-160
GAAAATCAAGAACTAACACTGTACTTAGAT142CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAAGGCTTTGGGTCAC
MTYDN11TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV258675.1:141-159
GAAAATCAAGAACTAACACTGTACTTAGAT141CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
MTYES30TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence.
EV262174.1:141-159
GAAAATCAAGAACTAACACTGTACTTAGAT141CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTCCTCA
METAZ94TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
EY477157.1:142-160
GAAAATCAAGAACTAACACTGTACTTAGAT142CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
Trifolium repens mRNA, clone: WCC09i11_069, unspecified EST.
FY457304.1:130-148
CTAGAAAATCAAGAACCACTGTACTTCGAT130CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC13n15_040, unspecified EST.
FY458804.1:91-109
CTAGAAAATCAAGAACCACTGTACTTCGAT91CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC15m24_087, unspecified EST.
FY459480.1:113-131
CTAGAAAATCAAGAACCACTGTACTTCGAT113CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC18b16_050, unspecified EST.
FY460279.1:60-78
CTAGAAAATCAAGAACCACTGTACTTCGAT60CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC19o14, unspecified EST.
FY460925.1:92-110
CTAGAAAATCAAGAACCACTGTACTTCGAT92CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACATCAATC
Trifolium repens mRNA, clone: WCC20h08, unspecified EST.
FY461119.1:92-110
CTAGAAAATCAAGAACCACTGTACTTCGAT92CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC20h09, unspecified EST.
FY461120.1:93-111
CTAGAAAATCAAGAACCACTGTACTTCGAT93CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC21a11_065, unspecified EST.
FY461314.1:124-142
CTAGAAAATCAAGAACCACTGTACTTCGAT124CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC21i03_037, unspecified EST.
FY461479.1:117-135
CTAGAAAATCAAGAACCACTGTACTTCGAT117CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC21j16_054, unspecified EST.
FY461515.1:62-80
CTAGAAAATCAAGAACCACTGTACTTCGAT62CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC22d01_010, unspecified EST.
FY461724.1:131-149
CTAGAAAATCAAGAACCACTGTACTTCGAT131CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC23o16_063, unspecified EST.
FY462341.1:111-129
CTAGAAAATCAAGAACCACTGTACTTCGAT111CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC23o22_063, unspecified EST.
FY462347.1:93-111
CTAGAAAATCAAGAACCACTGTACTTCGAT93CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC30i09, unspecified EST.
FY464684.1:115-133
CTAGAAAATCAAGAACCACTGTACTTCGAT115CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
Trifolium repens mRNA, clone: WCC40a14_017, unspecified EST.
FY468113.1:120-138
CTAGAAAATCAAGAACCACTGTACTTCGAT120CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACATCAATC
Trifolium repens mRNA, clone: WCC43g02_027, unspecified EST.
FY469306.1:112-130
CTAGAAAATCAAGAACCACTGTACTTCGAT112CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACAACAACAATCTTC
MEUBF40TF JCVI-MT2 Medicago truncatula cDNA 5', mRNA sequence.
GE348159.1:138-156
GAAAATCAAGAACTAACACTGTACTTAGAT138CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
METCN27TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence.
GT139596.1:142-160
GAAAATCAAGAACTAACACTGTACTTAGAT142CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
TSA: Lens culinaris contig00420.Lecu mRNA sequence.
JI846713.1:118-136
CTAGAAAATCAAGAACCACTGTACTCCGAT118CCCTTTCACCTTCACCTAGATTCTCCAATTCAGAACCATCACCTTCTCA
Mus musculus clone RP24-182A18, WORKING DRAFT SEQUENCE, 15 unordered pieces.
AC104222.5:11664-11682
TTTCAGATGTCTGGATTAGAGACAAGAGAA11664CCCTTTCACCTTCACCTAGACGGAATCAATACTTGGCAGGAACTGACAG
Mouse DNA sequence *** SEQUENCING CANCELLED *** from clone RP23-134D18.
BX679658.3:16200-16218
TTTCAGATGTCTGGATTAGAGACAAGAGAA16200CCCTTTCACCTTCACCTAGACGGAATCAATACTTGGCAGGAACTGACAG
Medicago truncatula chromosome 8 clone mth2-28c12, complete sequence.
AC152347.14:91937-91955
GAAAATCAAGAACTAACACTGTACTTAGAT91937CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
Medicago truncatula clone MTYF1_F2_F3_F41G-O-5 unknown mRNA.
BT051290.1:137-155
GAAAATCAAGAACTAACACTGTACTTAGAT137CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
Medicago truncatula clone MTYFP_FQ_FR_FS1G-E-6 unknown mRNA.
BT053494.1:141-159
GAAAATCAAGAACTAACACTGTACTTAGAT141CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTCCTCA
Medicago truncatula clone JCVI-FLMt-2F5 unknown mRNA.
BT141794.1:142-160
GAAAATCAAGAACTAACACTGTACTTAGAT142CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
Medicago truncatula clone JCVI-FLMt-19J21 unknown mRNA.
BT145410.1:139-157
GAAAATCAAGAACTAACACTGTACTTAGAT139CCCTTTCACCTTCACCTAGATTCTGCAATTCACAAGATTCACCTTCTCA
Wolffia australiana isolate 7733 chromosome 10.
CP092609.1:15130648-15130666
TCTTAGAATGATAGGTGCTAAACTTAGATC15130648CCCTTTCACCTTCACCTAGTTACAATAAAATCGACGGGGATCTCACAAT
Trifolium subterraneum genome assembly, chromosome: 4.
OX637464.1:7201522-7201540
CTAGAAAATCAAAAACCACTGTACTTCGAT7201522CCCTTTCACCTTCACCTAGATTCTCCAATTCACAACATCAACAACAATC
Medicago lupulina genome assembly, chromosome: 5.
OY283143.1:7830726-7830744
GAAAATCAAGAACCAACCCTGTACTTAGAT7830726CCCTTTCACCTTCACCTAGATTCTGCAATTCACACGATTCATCTTCTCA
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737475.1:262570497-262570515
TTTAAATATTGTTGTCGGGTCGCCCGTTTC262570497CCCTTTCACCTTCACCTAGCCACTCTACCCAGCCCACCTAGCCCTACCC
Hordeum bulbosum genome assembly, chromosome: 2H_2.
OY737497.1:261234565-261234583
TTTAAATATTGTTGTCGGGTCGCCCGTTTC261234565CCCTTTCACCTTCACCTAGCCACTCTACCCAGCCCACCTAGCCCTACCC
Hordeum bulbosum genome assembly, chromosome: 2H_3.
OY737881.1:266336422-266336440
TTTAAATATTGTTGTCGGGTCGCCCGTTTC266336422CCCTTTCACCTTCACCTAGCCACTCTACCCAGCCCACCTAGCCCTACCC
Limenitis camilla genome assembly, chromosome: 19.
LR990243.1:7233707-7233725
TAGAGCTTCGCTTCACATGGGGTCCATCAG7233707CCCTTTCACCTTCACCTAGCCTAGCTAGTGGGGTCGTAGGCCTGTATTG
Papilio machaon genome assembly, chromosome: 23.
OU538780.1:3649949-3649967
AATTAAAATGAAATAATTAAAATTGTGTTT3649949CCCTTTCACCTTCACCTAGTTTATATTATTTTAAATAAAAAAATGACAA
Sepia lycidas genome assembly, chromosome: 17.
OZ010587.1:69117882-69117900
AGACGGCTTCGGGGTAGAGCGGCACACTCC69117882CCCTTTCACCTTCACCTAGCTGACCCTCGTTGCTGACCACTGAAGAAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCCTTTCACCTTCACCTAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTTTCACCTTCACCTAG | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.482 | 2.473 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTTTCACCTTCACCTAG&k=0&no_gap=0&offset=0&limit=50
2.646 | 0.164 | search_minus_done; http://172.18.8.135:50400/match?q=CTAGGTGAAGGTGAAAGGG&k=0&no_gap=0&offset=0&limit=0
2.646 | 0.000 | cgi_end;

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