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2025-04-06 11:41:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

EST1233204 ESTSYN-F Musa acuminata AAA Group cDNA clone pESTSYNF-9F6 5', mRNA sequence.
ES432997.1:92-112

ATATACATATATGTATATGTATATATGATC92CCGACAACAAGAAGACGTAGGTATATATATATATATGGGAAGAAGGTTCAA

EST1237424 ESTSYN-L Musa acuminata AAA Group cDNA clone pESTSYNL-11L3 5', mRNA sequence.
ES437218.1:104-124

ATATACATATATGTATATGTATATATGATC104CCGACAACAAGAAGACGTAGGTATATATATATATATGGGAAGAAGGTTCAA

TSA: Musa acuminata AAA Group Unigene86592_NK1 mRNA sequence.
JV447154.1:60-80

ATATACATATATGTATATGTATATATGATC60CCGACAACAAGAAGACGTAGGTATATATATATATATGGGAAGAAGGTTCAA

Musa acuminata subsp. malaccensis isolate AA chromosome 3.
CP126372.1:2631052-2631072

ATATACATATATGTATATGTATATATGATC2631052CCGACAACAAGAAGACGTAGGTATATATATATATATATAGGAAGAAGGTTC

Musa acuminata subsp. malaccensis isolate AA chromosome 14.
CP126383.1:2613594-2613614

ATATACATATATGTATATGTATATATGATC2613594CCGACAACAAGAAGACGTAGGTATATATATATATATATAGGAAGAAGGTTC

MUC4LH1005_A04_.b_021. Musa acuminata leaves HOT stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN238239.1:575-595

ACCTTCTTCCCATATATATATATATATATA575CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LH1010_A10_.b_069. Musa acuminata leaves HOT stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN238621.1:596-616

ACCTTCTTCCCATATATATATATATATATA596CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LC1002_D06_.b_046. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239199.1:542-562

TTGAACCTTCTTGCCATATATATATATATA542CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LC1004_A07_.b_049. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239329.1:517-537

CTTCTTCCCATATATATATATATATATATA517CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LC1004_F10_.b_079. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239370.1:374-394

GAACCTTCTTCCCATATATATATATATATA374CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LC1006_C08_.b_054. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239497.1:99-119

CTTCTTCCCATATATATATATATATATATA99CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LC1006_E05_.b_035. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239513.1:523-543

ACCTTCTTCCCATATATATATATATATATA523CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LC1008_D05_.b_042. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239653.1:515-535

ACCTTCTTCCCATATATATATATATATATA515CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

MUC4LC1009_A09_.b_065. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239704.1:569-589

ACCTTCTTCCCATATATATATATATATATA569CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

Embrapa_Mbalbisiana_PKW_Leaf_015_H08_b Embrapa_Musa balbisiana_PKW_Leaf Musa balbisiana cDNA, mRNA sequence.
FL647462.1:697-717

TCTTCCCATATATATATATATATATATATA697CCTACGTCTTCTTGTTGTCGGGATCATATTTACATATACATATATGTATAT

Embrapa_Mbalbisiana_PKW_Leaf_024_C11_b Embrapa_Musa balbisiana_PKW_Leaf Musa balbisiana cDNA, mRNA sequence.
FL648279.1:699-719

CTTCCCCATATATATATATATATATATATA699CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

Embrapa_Musa_ABB_NonStressed_Cachaco_O477TF Embrapa_Musa_Cachaco_ABB_NonStressed Musa ABB Group cDNA, mRNA sequence.
FL659028.1:537-557

CTTTGGTTGAACCTTCTTCCCATATATATA537CCTACGTCTTCTTGTTGTCGGGATCATTTATACATATACATATATGTATAT

TSA: Musa acuminata AAA Group Unigene11938_B1 mRNA sequence.
JV357362.1:663-683

TTGAACCTTCTTCCCATATATATATATATA663CCTACGTCTTCTTGTTGTCGGGATCATATATACATATACATATATGTATAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

0.008 | 0.008 | search_start;
0.225 | 0.217 | search_plus_done; http://172.18.8.135:50400/match?q=CCGACAACAAGAAGACGTAGG&k=0&no_gap=0&offset=0&limit=50
0.887 | 0.662 | search_minus_done; http://172.18.8.135:50400/match?q=CCTACGTCTTCTTGTTGTCGG&k=0&no_gap=0&offset=0&limit=45
0.895 | 0.008 | cgi_end;

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