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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 08:13:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

11-E022768-021-014-F04-frev ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022F0414Q, mRNA sequence.
CX195291.1:196-215
TCATCCGGCCTCACTCGATCAGGAAGCGCG196CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
47RDOAH_UP_036_G05_17AUG2004_035 O. Alba 47RDOAH Brassica oleracea cDNA 5', mRNA sequence.
DY029016.1:85-104
TCATCCGGCCTCACTCGATCAGGAAGCGCG85CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
31ETGS12_UP_023_A01_08FEB2005_015 Brassica napus 31ETGS12 Brassica napus cDNA 5', mRNA sequence.
EE425386.1:76-95
TCATCCGGCCTCACTCGATCAGGAAGCGCG76CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
73ETGS36_UP_015_C03_21MAY2005_027 73ETGS36 Brassica napus cDNA 5', mRNA sequence.
EE445924.1:242-261
TCATCCGGCCTCACTCGATCAGGAAGCGCG242CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
0147662 Brassica napus Etiolated seedlings (pSPORT1) Brassica napus cDNA, mRNA sequence.
EV178138.1:307-326
TCATCCGGCCTCACTCGATCAGGAAGCGCG307CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
BNAOV1GH_T3_094_B06_20SEPT2007_046 BNAOV1GH Brassica napus cDNA 5', mRNA sequence.
GR449957.1:216-235
TCATCCGGCCTCACTCGATCAGGAAGCGCG216CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
lkg53d08.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ068088.1:663-682
TCATCCGGCCTCACTCGATCAGGAAGCGCG663CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
Brassica napus cultivar Xiang5A chromosome 6.
CP123881.1:68633317-68633336
TCATCCGGCCTCACTCGATCAGGAAGCGCG68633317CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
Brassica napus genome assembly, chromosome: C04.
HG994368.1:62661554-62661573
TCATCCGGCCTCACTCGATCAGGAAGCGCG62661554CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
Brassica rapa genome, scaffold: A04.
LR031576.1:19072988-19073007
TCATCCGGCCTCACTCGATCAGGAAGCGCG19072988CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
Brassica oleracea HDEM genome, scaffold: C4.
LR031873.1:62294285-62294304
TCATCCGGCCTCACTCGATCAGGAAGCGCG62294285CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
Brassica rapa genome assembly, chromosome: A04.
LS974620.2:19495496-19495515
TCATCCGGCCTCACTCGATCAGGAAGCGCG19495496CCGCAATTCGAGAAGTGGAAGCTGTCAAAGAAAGACGGATTCAGCGGTGG
MAG: Flavobacterium sp. isolate GU0601_MAG5 chromosome, complete genome.
CP136574.1:724601-724620
AATGACTAATCCGGTAACTCCGGTTTCTTC724601TTCCACTTCTCGAATTGCGGTTTCTTCAATGGTTTCATTTTTTTCCATAC
BR090258 seed and seedling cDNA library KFSD Brassica rapa subsp. pekinensis cDNA clone KFSD-027G05 5', mRNA sequence.
EX103968.1:459-478
CCACCGCTGAATCCGTCTTTCTTTGACAGC459TTCCACTTCTCGAATTGCGGGGCGCTTCCTGATCGAGTGAGGCCGGATGA
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_25871.
FX724253.1:147-166
CCACCGCTGAATCCGTCTTTCTTTGACAGC147TTCCACTTCTCGAATTGCGGGGCGCTTCCTGATCGAGTGAGGCCGGATGA
Brassica napus cultivar Xiang5A chromosome 14.
CP123889.1:26088362-26088381
CCACCGCTGAATCCGTCTTTCTTTGACAGC26088362TTCCACTTCTCGAATTGCGGCGCGCTTCCTGATCGAGTGAGGCCGGATGA
Brassica napus genome assembly, chromosome: A04.
HG994358.1:20608127-20608146
CCACCGCTGAATCCGTCTTTCTTTGACAGC20608127TTCCACTTCTCGAATTGCGGCGCGCTTCCTGATCGAGTGAGGCCGGATGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCGCAATTCGAGAAGTGGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGCAATTCGAGAAGTGGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.420 | 0.411 | search_plus_done; http://172.18.8.135:50400/match?q=CCGCAATTCGAGAAGTGGAA&k=0&no_gap=0&offset=0&limit=50
0.516 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=TTCCACTTCTCGAATTGCGG&k=0&no_gap=0&offset=0&limit=38
0.519 | 0.003 | cgi_end;

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