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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-05 21:33:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apodemus sylvaticus genome assembly, chromosome: 7.
OX359304.1:108490503-108490520
GCAGTAGGACTGAGTTCCCTTAGTTCATCT108490503CCGCCTTCATCATCCTCTTCTGTGCTTGCTTGCTTATGCCTGTGATTT
Furcifer pardalis isolate Fpa_1 chromosome 1.
CP126890.1:165812873-165812890
TGGGTACCAGGGGGCGAGTTTCCTCCTCTG165812873CCGCCTTCATCATCCTCTTCTTTAGGCTTCATCTTATGGCCAGTTTGT
Furcifer pardalis isolate Fpa_1 chromosome 3.
CP126892.1:87208314-87208331
GGGGACCAGGGGATACTTTTTCCTCCTCTG87208314CCGCCTTCATCATCCTCTTCTTCAAGCTTCCTCTTCCTCACAGCCAGC
Betta splendens genome assembly, chromosome: 3.
LR132008.3:18798294-18798311
TCATCTCTGATAGTGAAGTTTCCTCTTTTA18798294CCGCCTTCATCATCCTCTGCAGCCTGGTTTCACCATCAGCCCTCCTGA
Rhinatrema bivittatum genome assembly, chromosome: 3.
LR584389.1:311354371-311354388
CTCACTAATAATGCAGGGAGGGAGCTGTCT311354371CCGCCTTCATCATCCTCTCACCCCCCACTCACCCACACACCATTCACT
Rhinatrema bivittatum genome assembly, chromosome: 3.
LR584389.1:311355566-311355583
CTCACTAATAATGCAGGGAGGGAGCTGTCT311355566CCGCCTTCATCATCCTCTCACCCCCCACTCACCCACACACCATTCACT
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:456655102-456655119
CCTGATTGCAGCGTCAGTTGATTCTTTCCT456655102CCGCCTTCATCATCCTCTGGTGAACCTCTGGCAGTTTCACTCTCATTC
Geotrypetes seraphini genome assembly, chromosome: 5.
LR699150.1:26948202-26948219
CCTAGCACATCAGCCGTTTCAGCCGAGCAA26948202CCGCCTTCATCATCCTCTGCGCACCAACCACAGGTCACCTCCCCCGAT
Poecilia reticulata genome assembly, chromosome: 22.
LR880666.1:8082273-8082290
ATTCAGCTTTGCCTTGCACACAAACAAACA8082273CCGCCTTCATCATCCTCTTTTTCTGAACAAGCGCTTTGTATCTTCCCA
Melanostigma gelatinosum genome assembly, chromosome: 21.
OX456518.1:904774-904791
CAGACAGAATCAGATCTTTACGCAGAAGCT904774CCGCCTTCATCATCCTCTGATTTCACTTTTGGGTTGACGACGCCCTCA
Gymnoscopelus braueri genome assembly, chromosome: 7.
OY725514.1:10968694-10968711
CATTCTTTAAACCTGTGCAAACCTCTAAAA10968694CCGCCTTCATCATCCTCTGACATCCAAAAATACACTTCTTCTGCTGAC
Sardina pilchardus genome assembly, chromosome: 11.
OY974096.1:2055465-2055482
TTCACAGTGCCAGCGGATGACAATGGAGCG2055465CCGCCTTCATCATCCTCTCTTTTTCATCCATTTTCTGTGTGTCAATTA
Sequence 40123 from patent US 9029636.
HK949186.1:243-260
TTCATCCGTACTTGCTTTGATCCACCACCA243CCGCCTTCATCATCCTCTTAGCTTATATGTTATTATTAAGACTAAGTA
Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1.
OV972893.1:1985691-1985708
GATTGTTGGCCGGAAACAGCCTCTGGAACT1985691CCGCCTTCATCATCCTCTCCACCGTCATCATTTTCGCCTGCATCAGTC
metagenome genome assembly, chromosome: 1.
OW818644.1:902658-902675
CGACGATGACCGTGCCCCTCTGTTCCTCGA902658CCGCCTTCATCATCCTCTCGAAGTCCTTGTTGCGGACCACGTTGTCGA
uncultured Pelomonas sp. isolate 9c715bbf-a9e2-4c31-b35f-bd28e5728fbc genome assembly, chromosome: 157.
OY820805.1:38105-38122
CACAGGTGAGAAGCCGGTTCTATTCAGCGA38105CCGCCTTCATCATCCTCTGGTAGCGTGCGACTACTTGCGCCACCTTCT
K28_A12 Filamentous Forced Diploid Ustilago maydis cDNA 3', mRNA sequence.
CF645015.1:50-67
GTCCGGNAATTCCCGGGTCGACCCACGCGT50CCGCCTTCATCATCCTCTTGACTTTTTGTTCCTTTCGTGGACAAAAGA
TSA: Nitella mirabilis comp20508_c0_seq1 mRNA sequence.
JV809146.1:2115-2132
CAAGCCCACAGGCATCCATCGCGAGTTCTT2115CCGCCTTCATCATCCTCTCTTCCGACAGCCTCAGCAATTCTTGGGCCT
GM_WBc0120E23.f GM_WBc Glycine max genomic clone GM_WBc0120E23 5', genomic survey sequence.
EI365161.1:848-865
CTTCATCCGTACTTGCTTTGATCCACACCA848CCGCCTTCATCATCCTCTTAGATT
GSS_Ba115P11.R GSS_Ba Glycine soja genomic 3', genomic survey sequence.
HN036203.1:805-822
TTCATCCGTACTTGCTTTGATCCACCACCA805CCGCCTTCATCATCCTCTTAGCTTATATGTTATTATTAAGACTAAGTA
Anguilla anguilla clone scaffold1333_rev_HoxA, *** SEQUENCING IN PROGRESS ***, 26 ordered pieces.
JF891392.1:49800-49817
GACCCGCAGCCCCCGGTTCGCTTTGACACC49800CCGCCTTCATCATCCTCTACCTCGGCGGAGATGGCCCGGAAGGGGAGC
Anguilla japonica clone 2057_HoxAa, *** SEQUENCING IN PROGRESS ***, 49 ordered pieces.
JQ976895.1:30979-30996
GACCCGCAGCCCCCGGTTCGCTTTGACACC30979CCGCCTTCATCATCCTCTACCTCGGCGGAGATGGCCCGGAAGGGGAGC
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:14495147-14495164
TCCCAATCGTCCAAGCACCCATCATCGCCA14495147CCGCCTTCATCATCCTCTGTGATATTTCCAGAGCAACAGCCACCGCTG
Prunus dulcis DNA, pseudomolecule Pd05.
AP019301.1:14499825-14499842
TCCCAATCGTCCAAGCACCCATCATCGCCA14499825CCGCCTTCATCATCCTCTGTGATATTTCCAGAGCAACAGCCACCGCTG
Pyricularia oryzae isolate MZ5-1-6 chromosome 1, complete sequence.
CP034204.1:1654077-1654094
TCATCATCGGCCCGCAGCTGGCCGTCGCGG1654077CCGCCTTCATCATCCTCTTCACCAAGGCCGCCGAGATCGAGTCCAACG
Fusarium avenaceum strain WV21P1A chromosome 7.
CP109669.1:664384-664401
CACGTCTGATGCACCACAGGGCTCACGTCG664384CCGCCTTCATCATCCTCTTCATCGTCCGCAAACACGGTTCTTATCCCC
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 7.
CP125979.1:47830893-47830910
AGATGCCCGTTTGAAGAGTGGGAACCCTAG47830893CCGCCTTCATCATCCTCTCCATAGATCCCAACAGAGCCCTGTCGCCGC
Glycine max cultivar Williams 82 chromosome 20.
CP126445.1:20600112-20600129
TTCATCCGTACTTGCTTTGATCCACCACCA20600112CCGCCTTCATCATCCTCTTAGCTTATATGTTATTATTAAGACTAAGTA
Secale cereale genome assembly, chromosome: 1R.
LR738709.1:492639554-492639571
ATCTCACGCCGAACATAGTGGTGACGCTCT492639554CCGCCTTCATCATCCTCTGCGAGGGATACCTCGGGGTGCTCCCCACGC
Aegilops longissima genome assembly, chromosome: 3S.
LR881071.1:598748261-598748278
GGCTGGCCGTCCGCTCCGACCTCCAGCGCG598748261CCGCCTTCATCATCCTCTTCTTCCTCGCCTTCCCCTTTGTCGCTGGAA
Impatiens glandulifera genome assembly, chromosome: 1.
OU015481.1:71464410-71464427
TGTCGTCGTCGTCGTCATCATCATCATCGT71464410CCGCCTTCATCATCCTCTTCGTCGTCAACATCTATGATCTAAACGTGA
Aegilops speltoides subsp. speltoides genome assembly, chromosome: 3B.
OX082599.1:263699152-263699169
ACCTCACGCCGAACACGGTGGTGTTGCTCT263699152CCGCCTTCATCATCCTCTACGACGGGTATGTCGGCACACTCCCCACAC
Rosa rugosa genome assembly, chromosome: 5.
OY288195.1:22447870-22447887
AAATGACACCAAGTCTCTTACTACTCTTCT22447870CCGCCTTCATCATCCTCTTCTCACCATCCTCATGCTTGAAGCAACATC
Agrostemma githago genome assembly, chromosome: 3.
OY288241.1:24910370-24910387
GATTTCTTCCCATGTTTAGTGAACCATTGT24910370CCGCCTTCATCATCCTCTTTATGTAATCCACTAGAAACTCTAACGCGA
Hordeum bulbosum genome assembly, chromosome: 3H_1.
OY737411.1:174844892-174844909
GCGCAATAGCCTTGTCGCGTTGGTCTTCGA174844892CCGCCTTCATCATCCTCTCACGTGTTGGAACGGGTCGCTCCCCCCCGG
Chlorophyllum brunneum genome assembly, chromosome: 3.
OY756141.1:2047779-2047796
ATAGCACCATATGTTCCATCCTTTAGCCCC2047779CCGCCTTCATCATCCTCTCTGACTTCTCTCCCTTCCCCCGTGCTCATC
Spergularia marina genome assembly, chromosome: 17.
OY804560.1:15580630-15580647
CCCCACGGTGGGATTCCTCTCCCCGCGCGA15580630CCGCCTTCATCATCCTCTACGTCCCTTTTTTCTCATTTTCTCTCTCCT
Triticum timopheevii genome assembly, chromosome: 7At.
OY997273.1:460877026-460877043
TCGGCGCCTTCCAGATGGTGTTGCCCACCG460877026CCGCCTTCATCATCCTCTAGCCAGGACCAGACATCGTCGTCTCATCCT
Myrica gale genome assembly, chromosome: 5.
OZ005602.1:1884641-1884658
GAAATATTGGATCGGAGTTGACTTTAATGC1884641CCGCCTTCATCATCCTCTCTTGTCCATGATCGGACCCTTCTGTTCTCC
Lathyrus aphaca genome assembly, chromosome: 5.
OZ014523.1:540401971-540401988
GACTCCTCCTTCCAAGGTTAAACCCTGACA540401971CCGCCTTCATCATCCTCTGCCAAGCTGGAATTTTATTCGGCTATCGTT
Lathyrus aphaca genome assembly, chromosome: 7.
OZ014525.1:204347018-204347035
ACTCCTTCTTCCAAGGTGGAAACCTCGACA204347018CCGCCTTCATCATCCTCTGCCAAGATGGAATTTCATCCCGCTCTCGTT
Rhizobium etli CFN 42, complete genome.
CP000133.1:2960881-2960898
AGGCTTCGGCGATGTCGCCGGCGATTCGCT2960881CCGCCTTCATCATCCTCTGCCTGCTTTCGGCGAGTTCCTCTTCCTCGC
Rhizobium etli bv. mimosae str. Mim1, complete genome.
CP005950.1:2854875-2854892
AGGCTTCGGCGATGTCGCCGGCGATTCGCT2854875CCGCCTTCATCATCCTCTGCCTGCTTTCGGCGAGTTCCTCTTCCTCGC
Marinovum algicola DG 898, complete genome.
CP010855.1:1061343-1061360
CCTTCTCGGGGCCGATGGAATATGTCGCTT1061343CCGCCTTCATCATCCTCTCGGCACTGCCCTTCGTGCGCTACGTCCAGA
Rhizobium etli strain NXC12 chromosome, complete genome.
CP020906.1:2865712-2865729
AGGCTTCGGCGATGTCGCCGGCGATTCGCT2865712CCGCCTTCATCATCCTCTGCCTGCTTTCGGCGAGTTCCTCTTCCTCGC
Rhizobium sp. NXC14 chromosome, complete genome.
CP021030.1:2983787-2983804
AGGCTTCGGCGATGTCGCCGGCTATTCGCT2983787CCGCCTTCATCATCCTCTGCCTGCTTTCGGCGAGTTCGTCCTCCTCGC
Priestia megaterium strain STB1 chromosome.
CP025700.2:694661-694678
ATAGGTTCAGAGGTAGCCCAACTAAAAGTC694661CCGCCTTCATCATCCTCTTTCTGATATTAATACCATTGGAATTATTGT
Priestia megaterium strain 2020WEIHUA_L chromosome, complete genome.
CP059457.1:3759017-3759034
ATAGGTTTAGAGGTAGCCCAACTAAAAGTC3759017CCGCCTTCATCATCCTCTTTCTAATATTAATACCATTGGAATTATTGT
Priestia megaterium strain B1 chromosome, complete genome.
CP064275.1:230958-230975
ATAGGTTTAGAGGTAACCCAACTAAAAGGC230958CCGCCTTCATCATCCTCTTTCTGATATTAATACCATTGGAATTATTGT
Priestia megaterium strain HGS7 chromosome, complete genome.
CP065213.1:3490460-3490477
ATAGGTTTAGAGGTAACCCAACTAAAAGGC3490460CCGCCTTCATCATCCTCTTTCTGATATTAATACCATTGGAATTATTGT
Rhizobium lentis strain BLR27 chromosome, complete genome.
CP071454.1:330713-330730
AGGCTTCGGCGATGTCGCCGGCGATTCGCT330713CCGCCTTCATCATCCTCTGCCTGCTTTCAGCGAGTTCGTCCTCCTCAC
Rhizobium bangladeshense strain BLR175 chromosome, complete genome.
CP071612.1:2931527-2931544
AGGCTTCGGCAATATCGCCGGCGATCCGCT2931527CCGCCTTCATCATCCTCTGCCTGCTTTCGGCGAGTTCGACCTCCTCGC
Rhizobium bangladeshense strain PLR8-1a chromosome, complete genome.
CP071618.1:2946774-2946791
AGGCTTCTGCAATATCGCCGGCGATCCGCT2946774CCGCCTTCATCATCCTCTGCCTGCTTTCGGCGAGTTCGACCTCCTCGC
Spirosoma sp. KNUC1025 chromosome, complete genome.
CP087139.1:1078218-1078235
AGCACATGGTAGTCGCGCATGGCAAAATGG1078218CCGCCTTCATCATCCTCTTTAACATCCTTCGCATCAATGTCGTGCGAG
Priestia megaterium strain BP01R2 chromosome, complete genome.
CP092387.1:3692521-3692538
ATAGGTTTAGAGGTAGCCCAACTAAAAGTC3692521CCGCCTTCATCATCCTCTTTCTAATATTAATACCATTGGAATTATTGT
Priestia megaterium strain Ag87 chromosome.
CP098610.1:4631752-4631769
ATAGGTTTAGAGGTAGCCCAACTAAAAGTC4631752CCGCCTTCATCATCCTCTTTCTGATATTAATACCATTGGAATTATTGT
Priestia megaterium strain B1 chromosome.
CP141294.1:3348081-3348098
ATAGGTTTAGAGGTAGCCCAACTAAAAGTC3348081CCGCCTTCATCATCCTCTTTCTGATATTAATACCATTGGAATTATTGT
Nysson spinosus genome assembly, chromosome: 1.
OU342830.1:7580976-7580993
ATCTTCATCATCAACTTCTTGTTCTTCCTC7580976CCGCCTTCATCATCCTCTGGCGTTGACTCTTTCCTCGCACGATTCGTG
Sarcophaga caerulescens genome assembly, chromosome: 2.
OV656873.1:76844124-76844141
CTAAATTCGAAGTTTTCATTATCACCATCG76844124CCGCCTTCATCATCCTCTTCTTCATCACTCTGACTACTTTCGTTTGAA
Diachrysia chrysitis genome assembly, chromosome: 1.
OW028642.1:9824035-9824052
TACTTATCACTTTCATGCCACCGTAGTCTT9824035CCGCCTTCATCATCCTCTTGACTCAGTTATAAGAGGGATATCTCCACA
Ypsolopha sequella genome assembly, chromosome: 3.
OW203986.1:626602-626619
GTGACGTCATCATGGGCTCCTGGTTCGTGT626602CCGCCTTCATCATCCTCTTTGCCATGGGTGAGTACAGTATTCCGAAAT
Nowickia ferox genome assembly, chromosome: 1.
OW387023.1:104322598-104322615
TGGATATCTGACAAATCTTCCGTTTGTATA104322598CCGCCTTCATCATCCTCTTGTTGCAAGTAACTTTGCATGTAATCCTGA
Thecophora atra genome assembly, chromosome: 1.
OW569397.1:1559334-1559351
GTGAGTATTACCACTGAACCCGACCTTCCC1559334CCGCCTTCATCATCCTCTGAAAAATTGTTGCTGTGACTCTTCTATCAA
Heterobilharzia americana genome assembly, chromosome: 4.
OX104106.1:60748030-60748047
TCACCCCATTCTGATTCACGATTAGCTTCA60748030CCGCCTTCATCATCCTCTGAGTATTGTTCATTTAAGCCAATTTGATCC
Heterobilharzia americana genome assembly, chromosome: 4.
OX104130.1:60698985-60699002
TCACCCCATTCTGATTCACGATTAGCTTCA60698985CCGCCTTCATCATCCTCTGAGTATTGTTCATTTAAGCCAATTTGATCC
Leptodirus hochenwarti genome assembly, chromosome: 7.
OX371182.1:9059329-9059346
AACATTTTTATTCCTACAAAAATGGTGCTG9059329CCGCCTTCATCATCCTCTGGTTAAACGTCAAAATCAACATATTACCCT
Oscarella lobularis genome assembly, chromosome: 6.
OX382155.1:368900-368917
TGATAGTGAGGAAGTGGCCCAATTCCACCA368900CCGCCTTCATCATCCTCTGCCGCACTTCGGTCAGCCGTTTCAGTTGGT
Ceriagrion tenellum genome assembly, chromosome: 10.
OY720642.1:3049834-3049851
TCAACTTTTGAATTGTCTTCTCGTCGGGCG3049834CCGCCTTCATCATCCTCTCCCGAGTTACGAATTATTCCTATCCCTTGA
Aporrectodea icterica genome assembly, chromosome: 11.
OY744612.1:14818260-14818277
TTTTTCACTCCCAGTCTATCCTCCTTCCGT14818260CCGCCTTCATCATCCTCTTACTTACTATTCCTCTTTCTCCTCTTCGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCGCCTTCATCATCCTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGCCTTCATCATCCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.564 | 0.555 | search_plus_done; http://172.18.8.135:50400/match?q=CCGCCTTCATCATCCTCT&k=0&no_gap=0&offset=0&limit=50
0.718 | 0.154 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGGATGATGAAGGCGG&k=0&no_gap=0&offset=0&limit=0
0.718 | 0.000 | cgi_end;

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