GGGenome | Results

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2025-04-09 01:55:00, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Porphyra yezoensis cDNA, clone:PF025c08_r, 5'end.
AU188383.1:457-476

GCTGCGCGGCGCGGGTCTTCATGGCCGATG457CCGCCTTTGCACATACTCTCTCGCGCCGTTTGTCCCCTCCCCAGGTGCGC

Porphyra yezoensis cDNA clone:PM016e06_r, 5' end.
AV432555.1:431-450

GCTGCGCGGCGCGGGTCTTCATGGCCGATG431CCGCCTTTGCACATACTCTCTCGCGCCGTTTGTCCCCTCCCCAGGTGCGC

Porphyra yezoensis cDNA clone:PM030c12_r, 5' end.
AV433528.1:424-443

GCGCACCTGGGGAGGGGACAAACGGCGCGA424GAGAGTATGTGCAAAGGCGGCATCGGCCATGAAGACCCGCGCCGCGCAGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.115 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=CCGCCTTTGCACATACTCTC&k=0&no_gap=0&offset=0&limit=50
0.146 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=GAGAGTATGTGCAAAGGCGG&k=0&no_gap=0&offset=0&limit=48
0.146 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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