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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2026-03-06 10:11:46, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Brassica napus cultivar Xiang5A chromosome 19.
CP151914.1:4196406-4196425
ATGATAGAATAGGTATGGCTGTGGTGCTCT4196406CCGCTGTCTCCTCACTAACCGGAGATGTTCTTGTATTCCTACGTCTTCTT
Brassica napus genome assembly, chromosome: C09.
HG994373.1:4808134-4808153
ATGATAGAATAGGTATGGCTGTGGTGCTCT4808134CCGCTGTCTCCTCACTAACCGGAGATGTTCTTGTATTCCTACGTCTTCTT
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:4974445-4974464
ATGATAGAATAGGTATGGCTGTGGTGCTCT4974445CCGCTGTCTCCTCACTAACCGGAGATGTTCTTGTATTCCTACGTCTTCTT
Brassica oleracea genome assembly, chromosome: 9.
OZ281592.1:4967086-4967105
ATGATAGAATAGGTATGGCTGTGGTGCTCT4967086CCGCTGTCTCCTCACTAACCGGAGATGTTCTTGTATTCCTACGTCTTCTT
Brassica oleracea genome assembly, chromosome: 9.
OZ281602.1:5019381-5019400
ATGATAGAATAGGTATGGCTGTGGTGCTCT5019381CCGCTGTCTCCTCACTAACCGGAGATGTTCTTGTATTCCTACGTCTTCTT
Brassica oleracea var. botrytis genome assembly, chromosome: 9.
OZ282434.1:4731207-4731226
ATGATAGAATAGGTATGGCTGTGGTGCTCT4731207CCGCTGTCTCCTCACTAACCGGAGATGTTCTTGTATTCCTACGTCTTCTT
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:64354802-64354821
AAGAAGACGTAGGAATACAAGAACATCTCC64354802GGTTAGTGAGGAGACAGCGGAGAGCACCACAGCCATACCTATTCTATCAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCGCTGTCTCCTCACTAACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGCTGTCTCCTCACTAACC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.391 | 0.382 | search_plus_done; http://172.18.8.135:50900/match?q=CCGCTGTCTCCTCACTAACC&k=0&no_gap=0&offset=0&limit=50
0.655 | 0.264 | search_minus_done; http://172.18.8.135:50900/match?q=GGTTAGTGAGGAGACAGCGG&k=0&no_gap=0&offset=0&limit=44
0.656 | 0.001 | cgi_end;

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