GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 17:29:21, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pm_0457 Fruits and flowers of Prunus mume cv. Xiyeqing Prunus mume cDNA, mRNA sequence.
GW869031.1:368-385
ACAGAACGGCGTCGTTGAAGAACGCAAAGA368CCGTAATAACCACCGTCCCTTCGGTAATCTAGGGATGAGGCCCGGAGG
Prunus mume strain hongmei clone P07 SSR marker genomic sequence.
GU458008.1:1-18
1CCGTAATAACCACCGTCCGCTCGCCCACGGTTTCGACCCGCTAGGACT
Prunus mume strain oushuku clone P08 SSR marker genomic sequence.
GU458009.1:1-18
1CCGTAATAACCACCGTCCGCTCGCCCATTGTTTCGACCCGCTAGGACT
Prunus americana strain kuhehonglian clone A27 SSR marker genomic sequence.
GU458028.1:1-18
1CCGTAATAACCACCGTCCGCTTTTCCTAGGTTTCGACCCGCTAGGACT
Prunus americana strain fangshanxiangbai clone A28 SSR marker genomic sequence.
GU458029.1:1-18
1CCGTAATAACCACCGTCCGCTTTATGTAGGTTTCGACCCGCTAGGACT
Anopheles cruzii genome assembly, chromosome: 3.
OX030880.1:63429425-63429442
CCGAGGGGGGTAATGGGAAAGGACACTGGA63429425CCGTAATAACCACCGTCCGCTGGAAAACGGAGCCTTTCTGCTTTAAAA
Beris morrisii genome assembly, chromosome: 3.
OX638312.1:62071505-62071522
GCTCCTTCGTGATAGGGCTTTAATTTGGTT62071505CCGTAATAACCACCGTCCGTACATGGCGGCGATGGGTCGAATTTAAGG
GOTZ6846.g1 GOTZ marine metagenome genomic, genomic survey sequence.
KG203240.1:79-96
ATAGGAAGGGATTAAAGATGGGTGAAGATA79GGACGGTGGTTATTACGGGGGGCGGGAAAGGCATCGGTGAAGCGGTAT
Sphinx pinastri genome assembly, chromosome: 22.
OX387636.1:13942121-13942138
AGATGCTGCCTTCGTGGACGTCATCCACAC13942121GGACGGTGGTTATTACGGCACTCCCGCTAACTCTGGCCATGCAGACTT
Stenodema calcarata genome assembly, chromosome: 16.
OY986063.1:5188531-5188548
CGCACACCCATTTCAATGCCAATCCATTAC5188531GGACGGTGGTTATTACGGGGTTTTTTTTCTGAGACTGTTTGAAAACCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCGTAATAACCACCGTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGTAATAACCACCGTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.190 | 0.181 | search_plus_done; http://172.18.8.135:50400/match?q=CCGTAATAACCACCGTCC&k=0&no_gap=0&offset=0&limit=50
0.252 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=GGACGGTGGTTATTACGG&k=0&no_gap=0&offset=0&limit=43
0.254 | 0.002 | cgi_end;

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