GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 16:23:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjT09L22, TM0063.
AP004532.1:29948-29967
ATATATCAATCAATTTTTAATATATATCAG29948CCGTCCCAACTTTTCAATTTGGCATTATGGCATTATGCTATCTATTTCCT
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:79572838-79572857
ATATATCAATCAATTTTTAATATATATCAG79572838CCGTCCCAACTTTTCAATTTGGCATTATGGCATTATGCTATCTATTTCCT
1443280_5_L22_085 PY06 Carica papaya cDNA, mRNA sequence.
EX262927.1:820-839
GGAGAAAGGAGTGTTTGACTATGAGGCAGG820AAATTGAAAAGTTGGGACGGGTTAAAGGGTTCGAGTGCTTGGGAAAATGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCGTCCCAACTTTTCAATTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGTCCCAACTTTTCAATTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CCGTCCCAACTTTTCAATTT&k=0&no_gap=0&offset=0&limit=50
0.218 | 0.121 | search_minus_done; http://172.18.8.135:50400/match?q=AAATTGAAAAGTTGGGACGG&k=0&no_gap=0&offset=0&limit=48
0.219 | 0.001 | cgi_end;

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