GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 15:00:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT34P02, TM0146.
AP004969.1:14048-14067
CGATGGAGTTGGTGGTGGTGGTGGAGGTAG14048ATGTTACCTGATGGCGACGGTGGTCGTGGTAGTAGTAGTGAGCTGGTGGA
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:3609108-3609127
CGATGGAGTTGGTGGTGGTGGTGGAGGTAG3609108ATGTTACCTGATGGCGACGGTGGTCGTGGTAGTAGTAGTGACCTGGTGGA
Niallia circulans strain FDAARGOS_783 chromosome, complete genome.
CP053989.1:1766286-1766305
GACAAACCGGATATTGCGATTCTTGATGTT1766286ATGTTACCTGATGGCGACGGATTTTCCCTTCTGTCTTCTATCAGACAGCT
Lysinibacillus parviboronicapiens strain VT1065 chromosome, complete genome.
CP073713.1:4617157-4617176
GATAAGCCGGATATAGCAATTCTTGATGTC4617157ATGTTACCTGATGGCGACGGATTTTCACTTTTGTCATCCATCAGACAATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCGTCGCCATCAGGTAACAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGTCGCCATCAGGTAACAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.090 | 0.081 | search_plus_done; http://172.18.8.135:50400/match?q=CCGTCGCCATCAGGTAACAT&k=0&no_gap=0&offset=0&limit=50
0.102 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=ATGTTACCTGATGGCGACGG&k=0&no_gap=0&offset=0&limit=50
0.106 | 0.003 | cgi_end;

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