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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:23:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Rana temporaria genome assembly, chromosome: 13.
LR991692.1:1100041-1100060
ACAAAGCAAAAAAAGAACATTTCTCAAACA1100041CCGTCTCAAAAGCCCTAAACCGACCGCGTGAACTTGTCAAACTAGTCGCT
pOP-EO02978 EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02978 similar to Unknown protein, mRNA sequence.
ES324085.1:38-57
TTTGGAATTTCGGATACTCTCTGCGAAACC38CCGTCTCAAAAGCCCTAAACAGGGGACGGCGGAGAGGTGGAGTGCTCCGG
pOP-EO02978_EST_C_1_pSK_SK EO (Oil Palm Embryoid) Elaeis guineensis cDNA clone pOP-EO02978 5', mRNA sequence.
EY413359.1:52-71
TTTGGAATTTCGGATACTCTCTGCGAAACC52CCGTCTCAAAAGCCCTAAACAGGGGACGGCGGAGAGGTGGAGTGCTCCGG
PL_EST_PL2285 Plectus murrayi desiccated cDNA library Plectus murrayi cDNA 5', mRNA sequence.
FG621057.1:38-57
TTTGGAATTTCGGATACTCTCTGCGAAACC38CCGTCTCAAAAGCCCTAAACAGGGGACGGCGGAGAGGTGGAGTGCTCCGG
Elaeis guineensis EST, clone (6lib)_isotig33192.
LM628273.1:87-106
TTTGGAATTTCGGATACTCTCTGCGAAACC87CCGTCTCAAAAGCCCTAAACAGGGGACGGCGGAGAGGTGGAGTGCTCCGG
Ophiostoma piceae strain CECT20416 chromosome 5.
CP135126.1:2443541-2443560
ACAGGCTGCCACGATAGGCCATCTTTAAAG2443541CCGTCTCAAAAGCCCTAAACACACTATAACCGCCACCGTTGTAGTGACGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCGTCTCAAAAGCCCTAAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGTCTCAAAAGCCCTAAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.506 | 0.497 | search_plus_done; http://172.18.8.135:50400/match?q=CCGTCTCAAAAGCCCTAAAC&k=0&no_gap=0&offset=0&limit=50
0.606 | 0.100 | search_minus_done; http://172.18.8.135:50400/match?q=GTTTAGGGCTTTTGAGACGG&k=0&no_gap=0&offset=0&limit=44
0.606 | 0.000 | cgi_end;

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