GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 02:47:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Jasminum sambac cultivar Hutoumoli linkage group Lg8.
CP073651.1:23136875-23136893
CATATATGAAGCAAATGACATAGCACTTGG23136875CCGTGGTGCTTTTGGTGATCTATAACCTCCCTCCATGGCTGTCCATGAA
Manihot esculenta starch synthase isoform I (SSI) mRNA, complete cds.
EF667960.1:707-725
CCATAGACCTGGAAATCCATATGGTGATAG707CCGTGGTGCTTTTGGTGATAATCAGTTTCGTTTCACTTTACTCTGCCAT
Manihot esculenta AT1G02020 mRNA, partial sequence.
KY524588.1:324-342
CCATAGACCTGGAAATCCATATGGTGATAG324CCGTGGTGCTTTTGGTGATAATCAGTTTCGTTTCACTTTACTCTGCCAT
Anopheles coluzzii genome assembly, chromosome: 3.
OX030892.1:92712805-92712823
TTACATTTTTTTGTTTAGCATGCCACACCT92712805CCGTGGTGCTTTTGGTGATTGATCAACGTGATGGAGTCGTGATGGAGCT
Anopheles gambiae genome assembly, chromosome: 3.
OX030908.1:96651451-96651469
TTTACATTTTTTGTTTAGCATGCCACACCT96651451CCGTGGTGCTTTTGGTGATTGATCAACGTGATGGAGTCGTGATGGAACT
Nephrocerus scutellatus genome assembly, chromosome: 5.
OX352765.1:14665028-14665046
CGAGATATTTAACCTCACTGGAATAATCTA14665028CCGTGGTGCTTTTGGTGATGATATGTCCCAACTTGGATAGTCTTCTTAT
Protonemura montana genome assembly, chromosome: 2.
OX387603.1:11623880-11623898
CGAAGAAAGTTGTTCGGATACAATTCCATC11623880CCGTGGTGCTTTTGGTGATGAGATATATAAAGCAGACAAATCCAACTGG
Amaurobius ferox genome assembly, chromosome: 11.
OX578146.1:101221807-101221825
TGAAGTTCTACAGCCTCATGTTCGCCTTTT101221807CCGTGGTGCTTTTGGTGATAAATTTGTTTTCATGGAACACAAAGCACCA
Populus nigra genome assembly, chromosome: 16.
OX637687.1:760792-760810
TAGCTGGAACAATCATGAAGCTACCTGATT760792ATCACCAAAAGCACCACGGCTATCACCATATGGGTTTCCAGGCCTGTGG
Pseudomonas sp. ACM7 chromosome.
CP024866.1:570235-570253
GTGTTGGCCAACAGCATCCCGGCGGCGGCA570235ATCACCAAAAGCACCACGGCGGCAATCCCGACGATGCTTAGCACCACGC
Shinella sumterensis strain 1760953 plasmid unnamed1, complete sequence.
CP132303.1:1149722-1149740
CGATAACTCAGGCTGCCGACAAGAAGCACG1149722ATCACCAAAAGCACCACGGAGAGCGCCGCGGCATAGCCGAAATCGCCGA
Craniophora ligustri genome assembly, chromosome: 5.
LR990959.1:978178-978196
ATTAGAACGACGTCTGAAAGGACTACTGAA978178ATCACCAAAAGCACCACGGCGAGTAGTACAATAACCAATACATTAACCA
Amaurobius ferox genome assembly, chromosome: 14.
OX578149.1:25563139-25563157
TGGTGTGTTGTCGTCCATGAAAACAAATTC25563139ATCACCAAAAGCACCACGGAAAAGGCTAATACGAGGCAGTAGAACTTCA
Anopheles arabiensis genome assembly, chromosome: 2.
OZ001348.1:2554743-2554761
AGTTTCATCACGACTCCATCACGTTGATCA2554743ATCACCAAAAGCACCACGGAGCTGTGGGCATGCTAAACAAAAAATGTAA
Maratus michaelseni genome assembly, chromosome: 3.
OZ007589.1:105360699-105360717
TGGTTCGTTGTCGTCCATGAAAACAAATTT105360699ATCACCAAAAGCACCACGGAAAAGGGAACATGAGGAAATAGAACTTCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCGTGGTGCTTTTGGTGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGTGGTGCTTTTGGTGAT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CCGTGGTGCTTTTGGTGAT&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=ATCACCAAAAGCACCACGG&k=0&no_gap=0&offset=0&limit=42
0.134 | 0.004 | cgi_end;

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