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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:32:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Felis catus Senzu DNA, chromosome: D2, American Shorthair breed.
AP023162.1:14570928-14570946
CGCTTTCTCTTAGGATAATGGCCAAGCTTC14570928CCTACAAGGCTTGTCAAGTCCTTCCTGACCTGGCCTTATTCCATCCATT
Zea mays chromosome 2 clone ZMMBBb-224F17; ZMMBBb0224F17, *** SEQUENCING IN PROGRESS ***, 15 unordered pieces.
AC198965.3:27792-27810
GCAACCCAAAGGCTTCATATCACCTCCTTC27792CCTACAAGGCTTGTCAAGTATATTTTGGTACCCATCGCTTGATGGGTCC
Prunus dulcis DNA, unplaced-scaffold_396.
AP020733.1:22580-22598
AGCCCTATGTGATTTTCATCATTGCAATAT22580CCTACAAGGCTTGTCAAGTTAATATGATGAATTCTTATCAGAAGATTAA
Lactuca saligna genome assembly, chromosome: 9.
OX465085.1:153413784-153413802
CAAAATTCGTAAATGGTCTCAAGAATTGAC153413784CCTACAAGGCTTGTCAAGTTGGACCGATGCTAGAGGGATACAATCTACA
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:10145518-10145536
AGCCCCTTGTTGGTCTTATCATTGCAATGC10145518CCTACAAGGCTTGTCAAGTTTATATGATGAACTCTCACAAGAACGTCAA
Dryas octopetala genome assembly, chromosome: 4.
OY992835.1:16085953-16085971
AGCCCTTTGTTGGTTTCATCATTGCAATAT16085953CCTACAAGGCTTGTCAAGTTTGTATGATGAACTCTCATAAGAAGATTAA
Myrica gale genome assembly, chromosome: 23.
OZ005620.1:13198033-13198051
TGAGATGCAATTAGGTATGTGCGGTCTTCT13198033CCTACAAGGCTTGTCAAGTTTAATCAATGTTGAGAAGGAGAGGATCGAA
Gari tellinella genome assembly, chromosome: 8.
OV277863.1:74594047-74594065
AAGAATACCCCCAAATACTACACACTACCC74594047CCTACAAGGCTTGTCAAGTATGTTTAATAATTCTGACCTTGAAAGTTCT
Zea mays cultivar B73 chromosome 2 clone CH201-304G17, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC177853.5:112520-112538
GGACCCATCAAGCGATGGGTACCAAAATAT112520ACTTGACAAGCCTTGTAGGGAAGGAGGTGATATGAAGCCTTTGGGTTGC
Prunus dulcis DNA, pseudomolecule Pd01.
AP019297.1:37721374-37721392
TCAAATAATAACAGAGAGTTCATCATATTA37721374ACTTGACAAGCCTTGTAGGATATTGCAATGATGAAAACCAGATAGGGCT
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:1372183-1372201
TTAATCTTCTGATGAGAATTCATCATATTA1372183ACTTGACAAGCCTTGTAGGATATTGCAATGATGAAAATCACATAGGGCT
Prunus dulcis DNA, pseudomolecule Pd03.
AP019299.1:17245103-17245121
TTAATCTTCTGATGAGAGTTCATCATATTA17245103ACTTGACAAGCCTTGTAGGATATTGCAATGATGAAAATCACATAGGGCT
Prunus dulcis DNA, unplaced-scaffold_1060.
AP021397.1:11592-11610
TTAATCTTCTGATGAGAGTTCATCATATTA11592ACTTGACAAGCCTTGTAGGATATTGCAATGATGAAAATCACATAGGGCT
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141969.1:20999858-20999876
TTGATGTTCTTGTGAGAGTTCATCATATAA20999858ACTTGACAAGCCTTGTAGGGTATTGCAATGATAAGACCAACAGAGGGCT
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141986.1:21621082-21621100
TTGATGTTCTTGTGAGAGTTCATCATATAA21621082ACTTGACAAGCCTTGTAGGGTATTGCAATGATAAGACCAACAGAGGGCT
Zea mays genome assembly, chromosome: 2.
LR897968.1:183480100-183480118
GGACCCATCAAGCGATGGGTACCAAAATAT183480100ACTTGACAAGCCTTGTAGGGAAGGAGGTGATATGAAGCCTTTGGGTTGC
Malus domestica genome assembly, chromosome: 17.
OU696693.1:20644608-20644626
TTGATGTTCTTGTGAGAGTTCATCATATAA20644608ACTTGACAAGCCTTGTAGGGTATTGCAATGATAAGACCAACAGAGGGCT
Malus domestica genome assembly, chromosome: 17.
OU745007.1:20953813-20953831
TTGATGTTCTTGTGAGAGTTCATCATATAA20953813ACTTGACAAGCCTTGTAGGGTATTGCAATGATAAGACCAACAGAGGGCT
Astragalus glycyphyllos genome assembly, chromosome: 2.
OY754308.1:36031720-36031738
GTTTTATTTTTTAAAAAATTCAGCCCCAAA36031720ACTTGACAAGCCTTGTAGGACCCTAAGTTTTGTAAAATCCACTCCTTTA
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:25296172-25296190
CTGATGTTCTTGTGAGAGTTCATCATATAA25296172ACTTGACAAGCCTTGTAGGGTATTGCAATCATAAGACCAACAAAGGGCT
Tridacna crocea genome assembly, chromosome: 4.
OX031059.1:4711780-4711798
CTCAACTCTTTTTGGAATGTCGTAAAATAT4711780ACTTGACAAGCCTTGTAGGCAAGATTTCGGTAACATAATATTTGTTATA
Magelona johnstoni genome assembly, chromosome: 16.
OZ012699.1:15482396-15482414
TGTATAATTTGTTTTGTATTTCCTATCTAA15482396ACTTGACAAGCCTTGTAGGACCACTGTGTCCTGTATCTATATGTACCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTACAAGGCTTGTCAAGT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTACAAGGCTTGTCAAGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.184 | 0.176 | search_plus_done; http://172.18.8.135:50400/match?q=CCTACAAGGCTTGTCAAGT&k=0&no_gap=0&offset=0&limit=50
0.278 | 0.093 | search_minus_done; http://172.18.8.135:50400/match?q=ACTTGACAAGCCTTGTAGG&k=0&no_gap=0&offset=0&limit=42
0.287 | 0.009 | cgi_end;

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