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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-05 15:52:22, GGGenome : DDBJ release 139.0 (Sep, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Musa troglodytarum cultivar karat chromosome 7.
CP097509.1:9015828-9015847
CAATCTATAACACATACCATTCTCATGATG9015828CCTACAGCTGCACCTCATCAGAATTCTGGTCATAATAAACTTGAACATTT
Avena sativa genome assembly, chromosome: 2A.
OX371416.1:349157693-349157712
AACTGACTGACGAAGCATCGGAGGCTTGTT349157693CCTACAGCTGCACCTCATCATATCACTGTGCGCAAGTATGGCGCCTGCGT
Avena sterilis genome assembly, chromosome: 2A.
OX371839.1:364016041-364016060
AATCGACTGACGAAGCATCAGAGGCTTGCA364016041CCTACAGCTGCACCTCATCATATCACTGTGCGCAAGTATGGCGCCTGCGT
Musa acuminata subsp. malaccensis isolate AA chromosome 7.
CP126376.1:33137532-33137551
AAATGTTCAAGTTTATTATGACCAGAATTC33137532TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa acuminata subsp. malaccensis isolate AA chromosome 18.
CP126387.1:32966984-32967003
AAATGTTCAAGTTTATTATGACCAGAATTC32966984TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A07.
HG996473.1:34033423-34033442
AATTGTTCAAGTTTATTATGACCAGAATTC34033423TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa schizocarpa genome assembly, chromosome: S07.
LS990920.1:37589644-37589663
AAATGTTCAAGTTTATTATGACCAGAATTC37589644TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa banksii genome assembly, chromosome: 7.
OZ184658.1:34641460-34641479
AAATGTTCAAGTTTATTATGACCAGAATTC34641460TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa acuminata var. zebrina genome assembly, chromosome: 7.
OZ184681.1:37255264-37255283
AAATGTTCAAGTTTATTATGACCAGAATTC37255264TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGGTTG
Musa hybrid cultivar genome assembly, chromosome: 7.
OZ185486.1:35430653-35430672
AAATGTTCAAGTTTATTATGACCAGAATTC35430653TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 7.
OZ193592.1:37113255-37113274
AAATGTTCAAGTTTATTATGACCAGAATTC37113255TGATGAGGTGCAGCTGTAGGCATCATGAGATTGGTATGTGTTATAGATTG
Sympetrum striolatum genome assembly, chromosome: 11.
OX388351.1:48755717-48755736
AATTCATTGGATTGATAGATTAAATCACTG48755717TGATGAGGTGCAGCTGTAGGTTTACCTAATCTATGCATGTACTTATGACA
Aplysina insularis genome assembly, chromosome: 17.
OZ184958.1:5907265-5907284
CACAGAAAGAGACACATGACAGCATTTCAG5907265TGATGAGGTGCAGCTGTAGGCCGCCGAAACGTCTGACTACAAGTGTGTTT
Satyrium pruni genome assembly, chromosome: 11.
OZ187616.1:11188541-11188560
GATGGGTGAGTAGGATCATGGTGACGGATA11188541TGATGAGGTGCAGCTGTAGGGGGTGGATATTGCAGGAGTGGCGAGGGGGG
Satyrium ilicis genome assembly, chromosome: 13.
OZ238122.1:13188105-13188124
GATGGGTGAGTAGGATCATGGTGACGGATA13188105TGATGAGGTGCAGCTGTAGGGGGTGGATATTACAGGAGTGGCGAGGGGGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTACAGCTGCACCTCATCA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTACAGCTGCACCTCATCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.199 | 0.190 | search_plus_done; http://172.18.8.135:50900/match?q=CCTACAGCTGCACCTCATCA&k=0&no_gap=0&offset=0&limit=50
0.369 | 0.170 | search_minus_done; http://172.18.8.135:50900/match?q=TGATGAGGTGCAGCTGTAGG&k=0&no_gap=0&offset=0&limit=47
0.378 | 0.008 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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