GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 06:10:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT32K11, TM0710.
AP007535.2:50008-50029
TATTGCTGTTTACCATGGAATTACTCTAAT50008CCTACTATTCTTTTGGAATTGCAAAACTATTTGCTTTTTTTTATGAGTATTT
Lotus japonicus genomic DNA, chromosome 3, clone: LjT42D01, TM0711.
AP007536.2:92201-92222
TATTGCTGTTTACCATGGAATTACTCTAAT92201CCTACTATTCTTTTGGAATTGCAAAACTATTTGCTTTTTTTTATGAGTATTT
Lotus japonicus B-129 DNA, chromosome 5, complete sequence.
AP022633.1:63320073-63320094
TATTGCTGTTTACCATGGAATTACTCTAAT63320073CCTACTATTCTTTTGGAATTGCAAAACTATTTGCTTTTTTTTATGAGTATTT
Lotus japonicus clone JCVI-FLLj-23C24 unknown mRNA.
BT145381.1:1770-1791
TATTGCTGTTTACCATGGAATTACTCTAAT1770CCTACTATTCTTTTGGAATTGCAAAACTATTTGCTTTTTTTTATGAACAAAA
Lotus japonicus cDNA, clone:SPD095f05_f, 3' end.
BP051608.1:67-88
AAATACTCATAAAAAAAAGCAAATAGTTNT67GCAATTCCAAAAGAATAGTAGGATTAGAGTAATTCCATGGTAAACAGCAATA
Lotus japonicus cDNA, clone:GENLf027a11, 3' end.
BP063750.1:19-40
AAAAAAAGCAAATAGTTT19GCAATTCCAAAAGAATAGTAGGATTAGAGTAATTCCATGGTAAACAGCAATA
Lotus japonicus cDNA, clone:GNf057d08, 3' end.
BP071613.1:1-22
1GCAATTCCAAAAGAATAGTAGGATTAGAGTAATTCCATGGTAAACAGCAATA
Lotus japonicus cDNA, clone: LjFL3-053-BF03.r0, 3'-end sequence.
FS361924.1:17-38
TTTTTTTTTTTTTTTT17GCAATTCCAAAAGAATAGTAGGATTAGAGTAATTCCATGGTAAACAGCAATA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTACTATTCTTTTGGAATTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTACTATTCTTTTGGAATTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CCTACTATTCTTTTGGAATTGC&k=0&no_gap=0&offset=0&limit=50
0.222 | 0.129 | search_minus_done; http://172.18.8.135:50400/match?q=GCAATTCCAAAAGAATAGTAGG&k=0&no_gap=0&offset=0&limit=46
0.225 | 0.003 | cgi_end;

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