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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-03-02 14:32:15, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Homo sapiens DNA, chromosome 16, nearly complete genome.
AP023476.1:59048102-59048121
TCCTTTGAGTATCTTCTGCAAATAAAAGGC59048102CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAATGAAAACACCACTTTG
Homo sapiens isolate CHM13 chromosome 16.
CP068262.2:60449510-60449529
TCCTTTGAGTATCTTCTGCAAATAAAAGGC60449510CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAATGAAAACACCACTTTG
Homo sapiens isolate NA24385 chromosome 16.
CP139527.2:54740361-54740380
TCCTTTGAGTATCTTCTGCAAATAAAAGGC54740361CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAATGAAAACACCACTTTG
Homo sapiens isolate NA24385 chromosome 16.
CP139550.2:57968977-57968996
TCCTTTGAGTATCTTCTGCAAATAAAAGGC57968977CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAATGAAAACACCACTTTG
Macaca fascicularis isolate 582-1 chromosome 20.
CP141342.1:50635403-50635422
TCCTTTGAGTATCTTCTGCAAATAAAAGGC50635403CCTATTCTTCAGCTTCCCCCAGCTTTATTCAGAATGAAAACACCACTTTG
Onychomys torridus genome assembly, chromosome: 5.
LR877192.1:19521489-19521508
TCCTTTGACTATCTCCTGCAAATAAAAGGC19521489CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAGTGAAAACACCACTTTG
Acomys russatus genome assembly, chromosome: 26.
LR877237.1:18151502-18151521
TCCTTTGACTATCTCCCGCAAATAAAAGGC18151502CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAGTGAAAACACCACTTTG
Onychomys arenicola genome assembly, chromosome: 5.
OX460351.1:20209689-20209708
TCCTTTGACTATCTCCTGCAAATAAAAGGC20209689CCTATTCTTCAGCTTCCCCCAGCTTTATTCAGAGTGAAAACACCACTTTG
Onychomys leucogaster genome assembly, chromosome: 5.
OX460375.1:20031768-20031787
TCCTTTGACTATCTCCTGCAAATAAAAGGC20031768CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAGTGAAAACACCACTTTG
Peromyscus eremicus genome assembly, chromosome: 5.
OX460398.1:133422556-133422575
TCCTTTGACTATCTCCTGCAAATAAAAGGC133422556CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAGTGAAAACACCACTTTG
Onychomys leucogaster genome assembly, chromosome: 5.
OX460422.1:20535295-20535314
TCCTTTGACTATCTCCTGCAAATAAAAGGC20535295CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAGTGAAAACACCACTTTG
Onychomys arenicola genome assembly, chromosome: 5.
OX460446.1:20627003-20627022
TCCTTTGACTATCTCCTGCAAATAAAAGGC20627003CCTATTCTTCAGCTTCCCCCAGCTTTATTCAGAGTGAAAACACCACTTTG
Peromyscus eremicus genome assembly, chromosome: 5.
OX460470.1:135944142-135944161
TCCTTTGACTATCTCCTGCAAATAAAAGGC135944142CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAGTGAAAACACCACTTTG
Onychomys torridus genome assembly, chromosome: 5.
OX460886.1:19521489-19521508
TCCTTTGACTATCTCCTGCAAATAAAAGGC19521489CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAGTGAAAACACCACTTTG
Mustela lutreola genome assembly, chromosome: 18.
OZ182619.1:21849745-21849764
CTACCCCGGCCAGTCCATCCGGGAACTGCC21849745CCTATTCTTCAGCTTCCCCCCGCCGGGCGATGCCTGGGAGCTCGCCTATG
Eukaryotic synthetic construct chromosome 16.
CP034494.1:54625392-54625411
TCCTTTGAGTATCTTCTGCAAATAAAAGGC54625392CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAATGAAAACACCACTTTG
Eukaryotic synthetic construct chromosome 16.
CP034519.1:54625392-54625411
TCCTTTGAGTATCTTCTGCAAATAAAAGGC54625392CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAATGAAAACACCACTTTG
TSA: Mustela putorius furo MPF81000056contig1/1 mRNA sequence.
JP004863.1:64-83
CTACCCCGGCCAGTCCATCCAGGAACTGCC64CCTATTCTTCAGCTTCCCCCCGCCGGGCGATGCCTGGGAGCTCGCCTATG
TSA: Musa acuminata AAA Group Unigene14899_B1 mRNA sequence.
JV360469.1:185-204
CCTCCTCTGCTACGTCCTCTGGCTTCGCCT185CCTATTCTTCAGCTTCCCCCTTGACTCCTCCTCCCCCGCGTCGTATTCCT
TSA: Musa acuminata AAA Group Unigene100205_NK1 mRNA sequence.
JV432519.1:193-212
CCTCCTCTGCTACGTCCTCTGGCTTCGCCT193CCTATTCTTCAGCTTCCCCCTTGACTCCTCCTCCCCCGCGTCGTATTCCT
Homo sapiens chromosome 16 clone RP11-508M7, WORKING DRAFT SEQUENCE, 11 unordered pieces.
AC025288.3:168773-168792
TCCTTTGAGTATCTTCTGCAAATAAAAGGC168773CCTATTCTTCAGCTTCCCCCAGCTTTATTCGGAATGAAAACACCACTTTG
Spodiopogon sagittifolius isolate Sample 1 chromosome 3.
CP159266.1:37100047-37100066
CTTCTTCAGCGGGTTTCTCCTTTGCCCCCA37100047CCTATTCTTCAGCTTCCCCCATTGCAGTATCATTGAAGGCACCATATTCA
Spodiopogon sagittifolius isolate Sample 1 chromosome 7.
CP159270.1:4446012-4446031
CTTCTTCAACGGGTTTCTCCTTTGCCCCCA4446012CCTATTCTTCAGCTTCCCCCATTGCAGTATCATTGAAGGCACCATATTCA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A05.
HG996470.1:6815333-6815352
CCTCCTCTGCTACGTCCTCTGGCTTCGCCT6815333CCTATTCTTCAGCTTCCCCCTTGACTCCTCCTCCCCCGCGTCGTATTCCG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX590745.1:595183679-595183698
GACCAAGATCATCATCGGGCTCATATGATG595183679CCTATTCTTCAGCTTCCCCCATTATAGTACCATCATATTCGGGGAACCTA
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX638879.1:581354027-581354046
GACCAAGATCATCATCGGGCTCATATGATG581354027CCTATTCTTCAGCTTCCCCCATTATAGTACCATCATATTCGGGGAACCTA
Musa banksii genome assembly, chromosome: 5.
OZ184656.1:6915850-6915869
CCTCCTCTGCTACGTCCTCTGGCTTCGCCT6915850CCTATTCTTCAGCTTCCCCCTTGACTCCTCCTCCCCCGCGTCGTATTCCT
Musa textilis genome assembly, chromosome: 5.
OZ184668.1:12334671-12334690
CCTCCTCTGCTACGTCCTGTGGCTTCGCCT12334671CCTATTCTTCAGCTTCCCCCTCGGCTCCTCCTCCTCCGCCTCGTATTCCG
Musa hybrid cultivar genome assembly, chromosome: 5.
OZ185496.1:6727453-6727472
CCTCCTCTGCTACGTCCTCTGGCTTCGCCT6727453CCTATTCTTCAGCTTCCCCCTTGACTCCTCCTCCCCCGCGTCGTATTCCT
Stegodyphus lineatus isolate Slin_Negev_A chromosome X1.
CP160547.1:107823826-107823845
TGCACAATTTTTAACTTGTGTATTGTTTTT107823826CCTATTCTTCAGCTTCCCCCACTTTTTTTTGAGTGTGTGTGTATGTGTTT
Porites lutea genome assembly, chromosome: 3.
OY283126.1:20075758-20075777
TCCAGCGTTCTGCCTACTGGACCTATTCCG20075758CCTATTCTTCAGCTTCCCCCCATCAGCTGTCCTCTCCTATTACCTTAGCA
Porites lutea genome assembly, chromosome: 6.
OY283129.1:30201709-30201728
TCCTGCGTTCTTCCTACTTGACCTATTCCG30201709CCTATTCTTCAGCTTCCCCCCATCAGCTGTCCTCTCCTATTACCTTAGCA
Porites cylindrica genome assembly, chromosome: 1.
OZ037775.1:11339079-11339098
TCCTGCGTTCTGCCTACTGGACCTATTCCG11339079CCTATTCTTCAGCTTCCCCCTATCAGCTGTCCTCTCCTATTACCTTAGCA
Porites cylindrica genome assembly, chromosome: 3.
OZ037777.1:24752142-24752161
TCTGCCTGTCTGCCTACTGGATCTATTCTG24752142CCTATTCTTCAGCTTCCCCCCATCAGCTGTCCTCTCCTATTACCTTAGCA
Porites cylindrica genome assembly, chromosome: 12.
OZ037786.1:15158829-15158848
TCTGCCTGTCTGCCTACTGGACCTATTCTG15158829CCTATTCTTCAGCTTCCCCCCATCAGCTGTCCTCTCCTATTACCTTAGCA
Porites rus genome assembly, chromosome: 4.
OZ037995.1:18815829-18815848
TCCAGCGTTCTGCCTACTGGACCTATTCCG18815829CCTATTCTTCAGCTTCCCCCCATCAGCTGTCCTCTCCTATTACCTTAGCA
Porites rus genome assembly, chromosome: 5.
OZ037996.1:12642638-12642657
TTTGGTTGTTCGGTGACCGTAATTATTCCG12642638CCTATTCTTCAGCTTCCCCCCCATCAGCTGTCCTCTCCTATTACCTTAGC
Porites rus genome assembly, chromosome: 10.
OZ038001.1:6331819-6331838
TCCTCCGTTCTGCCTACTGGACCTATTCCG6331819CCTATTCTTCAGCTTCCCCCCATCAGCTGTCTTCTCCTATTACCTTAGCA
Lymnocryptes minimus genome assembly, chromosome: 19.
OZ199706.1:1596264-1596283
GCAGTTTTGAGATGATGCTATTGAATCATT1596264CCTATTCTTCAGCTTCCCCCATGGCACAAAACTTGATCTTAAGCACCAAT
Homo sapiens chromosome 16 clone RP11-182C10, complete sequence.
AC007491.7:106329-106348
CAAAGTGGTGTTTTCATTCCGAATAAAGCT106329GGGGGAAGCTGAAGAATAGGGCCTTTTATTTGCAGAAGATACTCAAAGGA
Homo sapiens 3 BAC RP11-817M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence.
AC112640.3:109439-109458
CAAAGTGGTGTTTTCATTCCGAATAAAGCT109439GGGGGAAGCTGAAGAATAGGGCCTTTTATTTGCAGAAGATACTCAAAGGA
Acomys kempi genome assembly, chromosome: 12.
OU015366.1:33197637-33197656
CAAAGTGGTGTTTTCACTCCGAATAAAGCT33197637GGGGGAAGCTGAAGAATAGGGCCTTTTATTTGCGGGAGATAGTCAAAGGA
Acomys dimidiatus genome assembly, chromosome: 11.
OU015384.1:32414957-32414976
CAAAGTGGTGTTTTCACTCCGAATAAAGCT32414957GGGGGAAGCTGAAGAATAGGGCCTTTTATTTGCGGGAGATAGTCAAAGGA
Apodemus sylvaticus genome assembly, chromosome: 21.
OX359318.1:38273835-38273854
CAAAGTGGTGTTTTCACTTCGAATAAAGCT38273835GGGGGAAGCTGAAGAATAGGGCCTTTTATTTGCAGGAGATAGTCAAAGGA
Acomys minous genome assembly, chromosome: 14.
OZ186488.1:35686434-35686453
CAAAGTGGTGTTTTCACTCCGAATAAAGCT35686434GGGGGAAGCTGAAGAATAGGGCCTTTTATTTGCGGGAGATAGTCAAAGGA
Cricetus cricetus genome assembly, chromosome: 4.
OZ199628.1:122170031-122170050
CAAAGTGGTGTTTTCACTCCGAATAAAGCT122170031GGGGGAAGCTGAAGAATAGGGCCTTTTATTTGCAGGAGATAGTCAAAGGA
Musa troglodytarum cultivar karat chromosome 5.
CP097507.1:9321869-9321888
CGGAATACGAGGCGGAGGAGGAGGAGCCGA9321869GGGGGAAGCTGAAGAATAGGAGGCGAAGCCACAGGACGTAGCAGAGGAGG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 5H.
OX460093.1:589239785-589239804
TAGGTTCCCCGAATATGATGGTACTATAAT589239785GGGGGAAGCTGAAGAATAGGCATCATATGAGCCCGATGATGATCTTGGTC
Polypogon viridis genome assembly, chromosome: 3.
OZ174309.1:172918921-172918940
TGGGTTCGCTGAATACGGGGATATTTTCAT172918921GGGGGAAGCTGAAGAATAGGCACATGATGAGCCCACTGATGATCTTGGTC
Musa acuminata subsp. burmannicoides genome assembly, chromosome: 5.
OZ193590.1:6442479-6442498
CGGAATACGACGCGGGGGAGGAGGAGTCAA6442479GGGGGAAGCTGAAGAATAGGAGGCGAAGCCAGAGGACGTAGCAGAGGAGG
Porites cylindrica genome assembly, chromosome: 6.
OZ037780.1:25463604-25463623
TGCTAAGGTAATAGGAGAGGACAGCTGATG25463604GGGGGAAGCTGAAGAATAGGCAGAATAGATCCAGTAGGCTGAGTAGGCAG
Porites rus genome assembly, chromosome: 4.
OZ037995.1:12454830-12454849
TGCTAAGGTAATAGGAGAGGACAGCTGATG12454830GGGGGAAGCTGAAGAATAGGCGGAATAGGTCCAGTAAGCAGAACGGAGGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTATTCTTCAGCTTCCCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTATTCTTCAGCTTCCCCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.183 | 0.174 | search_plus_done; http://172.18.8.135:50800/match?q=CCTATTCTTCAGCTTCCCCC&k=0&no_gap=0&offset=0&limit=50
0.284 | 0.101 | search_minus_done; http://172.18.8.135:50800/match?q=GGGGGAAGCTGAAGAATAGG&k=0&no_gap=0&offset=0&limit=11
0.293 | 0.009 | cgi_end;

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