GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 17:59:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Cannabis sativa PK00387.1_1.CasaPuKu mRNA sequence.
JP449529.1:703-722
AAAAAGTTGAAGCTAAAGATGGAGAAATTG703CCTCAACCTGCCCTATTATGAGGAGCACCGGCTAGTACTTTAGTACTACT
Parietaria judaica genome assembly, chromosome: 3.
OX940862.1:2795090-2795109
ATCATGCGATGGGAAATCCAGCCAAACACT2795090CCTCAACCTGCCCTATTATGAAAATTTTGTCTTCCACGGGATAGAATATG
Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 chromosome.
CP034453.1:5351664-5351683
TGTCGTCGTCGAGGTCGGCTTCGGCTCGGG5351664CCTCAACCTGCCCTATTATGACGCCGCCAGGGTGGAGCGGCTGGTCGGCG
Mesorhizobium sp. 113-3-3 DNA, complete genome.
AP023243.1:3026319-3026338
TGCCGACCAGCCGCTCGACCCTGGCGGCGT3026319CATAATAGGGCAGGTTGAGGCCCGAGCCGAAGCCGACCTCGACGACGACG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTCAACCTGCCCTATTATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCAACCTGCCCTATTATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.153 | 0.144 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCAACCTGCCCTATTATG&k=0&no_gap=0&offset=0&limit=50
0.204 | 0.051 | search_minus_done; http://172.18.8.135:50400/match?q=CATAATAGGGCAGGTTGAGG&k=0&no_gap=0&offset=0&limit=47
0.204 | 0.001 | cgi_end;

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