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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:26:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus pygmaeus genome assembly, chromosome: 8.
OX465310.1:50375290-50375309
CTGGCTGATCAGGACCCTCCCACGGTCTCT50375290CCTCAGCCTTGATCATGCACTGGTAGGTCCCTCGGCCTGGCCTGTGTCCT
Eptesicus nilssonii genome assembly, chromosome: 12.
OX621291.1:70006309-70006328
CTCCCCGGCTGGCCAACCTCCCATGTCCCT70006309CCTCAGCCTTGATCATGCACTGGTGATTTCCCTGGGCCTGGCCTGCACTC
Pipistrellus nathusii genome assembly, chromosome: 8.
OY882865.1:50165521-50165540
CTGGCTGGTCAGGACCCTCCCACGGTCTCT50165521CCTCAGCCTTGATCATGCACTGGTGGGGTCCCTCGGCCTGGCCTGTGTCC
Pipistrellus nathusii genome assembly, chromosome: 9.
OY882866.1:39618699-39618718
GAGACACCCTGAATCCCTTCCTCGGTTCCT39618699CCTCAGCCTTGATCATGCACCAGCGGGGTCCCTTGGTCTAGCCTGTACCC
Pipistrellus nathusii genome assembly, chromosome: 8.
OY883185.1:50152191-50152210
CTGGCTGATCAGGACCCTCCCACAGTTTCT50152191CCTCAGCCTTGATCATGCACTGGTGGGGTCCCTCAGCCTGGCCTGTGTCC
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH009_02002m, 5' end sequence.
AB450697.1:9-28
CTGTCAAC9CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTCTCTC
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH029_07004m, 5' end sequence.
AB450710.1:329-348
TTCCACTTATGCTCACTCTCTTCTGTCAAC329CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTCTCTC
Mdfrt3036b08.y1 Mdfrt Malus domestica cDNA clone Mdfrt3036b08 5' similar to SW:SBP1_ANTMA Q38741 SQUAMOSA-PROMOTER BINDING PROTEIN 1, mRNA sequence.
CO419137.1:177-196
CATATGATATGCTCTCTCTCTTCTGTCAAC177CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTCTCTC
Mdfrt3078i02.y1 Mdfrt Malus domestica cDNA clone Mdfrt3078i02 5' similar to SW:SBP2_ANTMA Q38740 SQUAMOSA-PROMOTER BINDING PROTEIN 2, mRNA sequence.
CV085483.1:415-434
CATATGATATGCTCTCTCTCTTCTGTCAAC415CCTCAGCCTTGATCATGCACCAATGAACTCTCTCTCTCTCTCTCTC
000501AEPA001697HT (AEPA) Pinkie expanding leaf Malus domestica cDNA clone AEPA001697, mRNA sequence.
EB110859.1:357-376
CATATGATATGCTCTCTCTCTTCTGTCAAC357CCTCAGCCTTGATCATGCACCAG
010419AASA004287HT (AASA) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASA004287, mRNA sequence.
EB124711.1:622-641
CATATGATATGCTCTCTCTCTTCTGTCAAC622CCTCAGCCTTGATCATGCACCAGNGAACTCTCTCTCTCTCTCTCTCTCTC
060505AASA004287CT (AASA) Royal Gala 10 DAFB fruit Malus domestica cDNA clone AASAA00428, mRNA sequence.
EG999281.1:622-641
CATATGATATGCTCTCTCTCTTCTGTCAAC622CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTCTCTC
SPFV11 Supression Substractive Hybridization cDNA library of pear inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GO924812.1:181-200
TTCCACTTATGCTCACTCTCTTCTGTCAAC181CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTCTCTC
SPFV37 Supression Substractive Hybridization cDNA library of pear inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GO924834.1:215-234
TTCCACTTATGCTCACTCTCTTCTGTCAAC215CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTCTCTC
SPFV48 Supression Substractive Hybridization cDNA library of pear inoculated with Venturia nashicola Pyrus x bretschneideri cDNA, mRNA sequence.
GO924844.1:159-178
TTCCACTTATGCTCACTCTCTTCTGTCAAC159CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTCTCCC
Pyrus pyrifolia mRNA, clone: NFW2_18_04, 5' end sequence, expressed in flower bud.
HX763404.1:328-347
TTCCACTTATGCTCACTCTCTTCTGTCAAC328CCTCAGCCTTGATCATGCACCAGTGAA
Pyrus pyrifolia mRNA, clone: NFW2_18_58, 5' end sequence, expressed in flower bud.
HX763450.1:328-347
TTCCACTTATGCTCACTCTCTTCTGTCAAC328CCTCAGCCTTGATCATGCACCAGTGAA
Pyrus pyrifolia mRNA, clone: NLE1_06_04, 5' end sequence, expressed in leaf bud.
HX766203.1:298-317
TTCCACTTATGCTCACTCTCTTCTGTCAAC298CCTCAGCCTTGATCATGCACCAGTGAA
TSA: Pyrus pyrifolia mRNA, contig: contig_1639.
FX432429.1:806-825
TTCCACTTATGCTCACTCTCTTCTGTCAAC806CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTC
TSA: Pyrus communis mRNA, contig: lc334.
FX608921.1:569-588
TTCCACTTATGCTTACTCTCTTCTGTCAAC569CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTCTC
TSA: Pyrus communis mRNA, contig: lc11207.
FX619791.1:327-346
TTCCACTTATGCTTACTCTCTTCTGTCAAC327CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTC
TSA: Pyrus communis mRNA, contig: lc39491.
FX646893.1:223-242
TTCCACTTATGCTCTCTCTCTTCTGTCAAC223CCTCAGCCTTGATCATGCACCAGTGAACTCTCTCTCTCTCTCTC
Phakellia ventilabrum genome assembly, chromosome: 21.
OY997398.1:2883434-2883453
AACATCTTGCACGTGAATAAGACTATTTTC2883434CCTCAGCCTTGATCATGCACGGCAAAAACAACAACAGTTTGAAAATAATC
Myotis daubentonii genome assembly, chromosome: 2.
OY725360.1:54746508-54746527
GGGTGCAGACAAGGCAGAGGGACCCCACCT54746508GTGCATGATCAAGGCTGAGGAGGGACCCAGGAGGTTGGCCAGCTGGGGAG
Pipistrellus nathusii genome assembly, chromosome: 7.
OY882864.1:45518582-45518601
GGGGCAAAGGCCAGGTGAGGGACCCCACTG45518582GTGCATGATCAAGGCTGAGGAGGGATGGGGAAGGTTGGTCAGCTCGGGAG
Pipistrellus nathusii genome assembly, chromosome: 7.
OY883184.1:45463051-45463070
GGGGCAAAGGCCAGGTGAGGGACCCCACTG45463051GTGCATGATCAAGGCTGAGGAGGGATGGGGAAGGTTGGTCAGCTCGGGAG
Mdfrt3036A07_e8570.g1 Mdfrt Malus domestica cDNA 5' similar to emb|CAD90156.1| squamosa promoter binding like-protein [Betula pendula] emb|CAD90157.1| squamosa promoter binding like-protein [Betula pe
GO550151.1:289-308
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG289GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Pyrus pyrifolia mRNA, clone: NFR1_32_41, 5' end sequence, expressed in fruit.
HX748366.1:8-27
TTCACTG8GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGTGAGCATAAGTGGAA
TSA: Pyrus x bretschneideri Unigene70617_XinShao mRNA sequence.
JR656984.1:29-48
GAGAGAGAGAGAGAGAGAGAGTTCACTG29GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGTGAGCATAAGTGGAA
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141919.1:39172897-39172916
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG39172897GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:40239990-40240009
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG40239990GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141962.1:37626806-37626825
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG37626806GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus hybrid cultivar cultivar Royalty chromosome 10.
CP141979.1:38090298-38090317
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG38090298GTGCATGATCAAGGCTGAGGATTGACAGAAGAGAGAGAGCATATCATATG
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143367.1:40421497-40421516
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG40421497GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus sylvestris genome assembly, chromosome: 10.
OU696512.1:39178778-39178797
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG39178778GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus domestica genome assembly, chromosome: 10.
OU696686.1:39683329-39683348
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG39683329GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus domestica genome assembly, chromosome: 10.
OU744551.1:39391105-39391124
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG39391105GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus domestica genome assembly, chromosome: 10.
OU744962.1:40665748-40665767
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG40665748GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus domestica genome assembly, chromosome: 10.
OU745000.1:39263703-39263722
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG39263703GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGAGAGCATATCATATG
Malus x robusta genome assembly, chromosome: 4.
OY720328.1:37924395-37924414
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG37924395GTGCATGATCAAGGCTGAGGATTGACAGAAGAGAGAGAGCATATCATATG
Pyrus communis genome assembly, chromosome: 3.
OY757070.1:27496047-27496066
GAGAGAGAGAGAGAGAGAGAGAGTTCACTG27496047GTGCATGATCAAGGCTGAGGGTTGACAGAAGAGAGTAAGCATAAGTGGAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCAGCCTTGATCATGCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCAGCCTTGATCATGCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.982 | 0.974 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCAGCCTTGATCATGCAC&k=0&no_gap=0&offset=0&limit=50
1.275 | 0.293 | search_minus_done; http://172.18.8.135:50400/match?q=GTGCATGATCAAGGCTGAGG&k=0&no_gap=0&offset=0&limit=27
1.287 | 0.012 | cgi_end;

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