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2025-03-14 20:59:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Fringilla coelebs genome assembly, chromosome: 10.
OY740734.1:22006383-22006402
CAGGCATGTGGAGCCCCTGCACATGGATCC22006383CCTCATCATCAGCAGCAGAAAGGCATAAGAAAATGTTCAACTCCTGTCCA
MAG: Viral metagenome isolate NIFA_virome_18499 genomic sequence.
ON448406.1:4165-4184
CTACAACAACAAAAGCACCATCATCAGCAG4165CCTCATCATCAGCAGCAGAACTATTAGAATATGAAGTGCGAAAAATGAAA
TSA: Raphanus sativus var. sativus RNA, contig: WG3_11504.
FX658731.1:1272-1291
CAACAACATCTTGCACAGTACCATCCACAT1272CCTCATCATCAGCAGCAGAAGCAAAGGCTTCTGTACTCTTGACGTTGTTG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_9697.
FX782147.1:1423-1442
CAACAACATCTTGCACAGTACCATCCACAT1423CCTCATCATCAGCAGCAGAAGCAAAGGCTTCTGTACTCTTGACGTTGTTG
TSA: Raphanus sativus RS05904 mRNA sequence.
JT790451.1:1356-1375
CAACAACATCTTGCACAGTACCATCCACAT1356CCTCATCATCAGCAGCAGAAGCAAAGGCTTCTGTACTCTTGACGTTGTTG
TSA: Raphanus sativus RS05905 mRNA sequence.
JT790452.1:1356-1375
CAACAACATCTTGCACAGTACCATCCACAT1356CCTCATCATCAGCAGCAGAAGCAAAGGCTTCTGTACTCTTGACGTTGTTG
TSA: Musa acuminata AAA Group Unigene21059_B1 mRNA sequence.
JV331003.1:493-512
CTCATGGGCCTACCGACATCCCACAGAAAG493CCTCATCATCAGCAGCAGAAGAAGCATCAGCTCCAGGAGCAGCAGCAGCA
TSA: Vitis vinifera Locus_1323_Transcript_6/11_Confidence_0.328.Vivi mRNA sequence.
KA167093.1:1014-1033
ATTTCACTGAGAAGATTCCAAAAGAATAAC1014CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCGTAATG
TSA: Vitis vinifera Locus_1323_Transcript_2/11_Confidence_0.475.Vivi mRNA sequence.
KA167094.1:1014-1033
ATTTCACTGAGAAGATTCCAAAAGAATAAC1014CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCGTAATG
TSA: Vitis vinifera Locus_1323_Transcript_10/11_Confidence_0.426.Vivi mRNA sequence.
KA167095.1:1698-1717
ATTTCACTGAGAAGATTCCAAAAGAATAAC1698CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCGTAATG
TSA: Vitis vinifera Locus_1323_Transcript_3/11_Confidence_0.443.Vivi mRNA sequence.
KA167096.1:1303-1322
ATTTCACTGAGAAGATTCCAAAAGAATAAC1303CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCGTAATG
TSA: Vitis vinifera Locus_1323_Transcript_7/11_Confidence_0.475.Vivi mRNA sequence.
KA167097.1:1657-1676
ATTTCACTGAGAAGATTCCAAAAGAATAAC1657CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCGTAATG
TSA: Vitis vinifera Locus_1323_Transcript_9/11_Confidence_0.443.Vivi mRNA sequence.
KA167098.1:2278-2297
ATTTCACTGAGAAGATTCCAAAAGAATAAC2278CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCGTAATG
A BAC library has been constructed from PN40024 genotype using the restriction enzyme HindIII (clone prefix : VV40024H).
CU861096.1:110-129
ATTTCACTGAGAAGATTCCAAAAGAATAAC110CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCTGCACA
Zea mays cultivar B73 chromosome 1 clone ZMMBBb-295E11, *** SEQUENCING IN PROGRESS ***, 7 unordered pieces.
AC201966.4:44568-44587
CCTCAGCATCAGCAGTTTCAGAAGCAGTAC44568CCTCATCATCAGCAGCAGAATCACCAGAACAATCAGTCAGGAGGAGGTCA
Musa troglodytarum cultivar karat chromosome 2.
CP097504.1:40483292-40483311
CTCCTGGGCCTACCGACATCCCACAGAAAG40483292CCTCATCATCAGCAGCAGAAGAAGCATCATCTCCAGGAGCAGCAGCAACA
Zea mays cultivar LT2357 chromosome 1.
CP116739.1:132804398-132804417
CCTCAGCATCAGCAGTTTCAGAAGCAGTAC132804398CCTCATCATCAGCAGCAGAATCACCAGAACAATCAGTCAGGAGGAGGTCA
Musa acuminata subsp. malaccensis isolate AA chromosome 2.
CP126371.1:23688142-23688161
CTCATGGGCCTACCGACATCCCACAGAAAG23688142CCTCATCATCAGCAGCAGAAGAAGCATCAGCTCCAGGAGCAGCAGCAGCA
Musa acuminata subsp. malaccensis isolate AA chromosome 13.
CP126382.1:23794010-23794029
CTCATGGGCCTACCGACATCCCACAGAAAG23794010CCTCATCATCAGCAGCAGAAGAAGCATCAGCTCCAGGAGCAGCAGCAGCA
Vitis vinifera cultivar Pinot Noir 40024 chromosome 7.
CP126654.1:2413101-2413120
ATTTCACTGAGAAGATTCCAAAAGAATAAC2413101CCTCATCATCAGCAGCAGAAAAATCCAAACCATCATGAATCTCCTGCACA
Musa acuminata subsp. malaccensis strain Doubled-haploid Pahang (DH-Pahang) genome assembly, chromosome: A02.
HG996467.1:22388444-22388463
CTCATGGGCCTACCGACATCCCACAGAAAG22388444CCTCATCATCAGCAGCAGAAGAAGCATCAGCTCCAGGAGCAGCAGCAGCA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:13927618-13927637
CAACAACATCTTGCACAGTACCATCCACAT13927618CCTCATCATCAGCAGCAGAAGCAAAGGCTTCTGTACTCTTGACGTTGTTG
Aegilops longissima genome assembly, chromosome: 4S.
LR881072.1:839878497-839878516
TCTTTGGCATAGCCTTCTTGCTTGAAGAAG839878497CCTCATCATCAGCAGCAGAATCCTCATTAAATTTCTTCACTGTTTCTCTG
Zea mays genome assembly, chromosome: 1.
LR897967.1:134681818-134681837
CCTCAGCATCAGCAGTTTCAGAAGCAGTAC134681818CCTCATCATCAGCAGCAGAATCACCAGAACAATCAGTCAGGAGGAGGTCA
Musa schizocarpa genome assembly, chromosome: S02.
LS990916.1:24235426-24235445
CTCCTGGGCCAACCGACATCCCACAGAAAG24235426CCTCATCATCAGCAGCAGAAGAAGCATCAGCTCCAGGAGCAGCAGCAGCA
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:13927618-13927637
CAACAACATCTTGCACAGTACCATCCACAT13927618CCTCATCATCAGCAGCAGAAGCAAAGGCTTCTGTACTCTTGACGTTGTTG
Gymnosoma rotundatum genome assembly, chromosome: 2.
OU744337.1:93953167-93953186
CACCACCAACTTCAGCAGCATCTTTATCAT93953167CCTCATCATCAGCAGCAGAAGAGAGTAAAAGATTTAAAAGTTGCTCAGCG
Pollenia amentaria genome assembly, chromosome: 3.
OX031008.1:65115504-65115523
TAATTAAAAACATGATCATCACATAATCCA65115504CCTCATCATCAGCAGCAGAAACAAAAAATAAGCGGCTCTTTAAGCAAATA
Coelopa pilipes genome assembly, chromosome: 2.
OX376697.1:38707291-38707310
GAAGAGTTATTAAATTAATCGAGTTATCGC38707291CCTCATCATCAGCAGCAGAACAGCCTTCACCGACGCCAACCATAACAACA
Bimastos eiseni genome assembly, chromosome: 5.
OY365810.1:12113049-12113068
CGCATTCACCATTCTCCTCCTCCTCCTCCT12113049CCTCATCATCAGCAGCAGAACCCACAGCAGCAAGCACCGATGAATCAGAA
Troglohyphantes excavatus genome assembly, chromosome: 12.
OZ010677.1:23770079-23770098
ATAAAATTCAGACATTTCAGGAGACATCCC23770079CCTCATCATCAGCAGCAGAAACGAAAAGTCTGTGCAAAACAAAATGAAAA
Maratus speciosus genome assembly, chromosome: 12.
OZ010799.1:211016443-211016462
AAATTAGACGTTTCGTTGTGCAACGCACAG211016443CCTCATCATCAGCAGCAGAATATTGAAACATGTCCTGGACATAGTCAAAG
Sequence 251 from Patent WO2009068564.
HB412712.1:651-670
CATTACGGAGATTCATGATGGTTTGGATTT651TTCTGCTGCTGATGATGAGGGTTATTCTTTCGGAATCTTCTCAGTGAAAT
Sequence 251 from patent US 8697948.
HJ934205.1:651-670
CATTACGGAGATTCATGATGGTTTGGATTT651TTCTGCTGCTGATGATGAGGGTTATTCTTTCGGAATCTTCTCAGTGAAAT
Sequence 251 from Patent EP2570426.
JB255703.1:651-670
CATTACGGAGATTCATGATGGTTTGGATTT651TTCTGCTGCTGATGATGAGGGTTATTCTTTCGGAATCTTCTCAGTGAAAT
Sequence 251 from Patent EP2581385.
LQ991782.1:651-670
CATTACGGAGATTCATGATGGTTTGGATTT651TTCTGCTGCTGATGATGAGGGTTATTCTTTCGGAATCTTCTCAGTGAAAT
Sequence 251 from Patent EP2574622.
LQ995839.1:651-670
CATTACGGAGATTCATGATGGTTTGGATTT651TTCTGCTGCTGATGATGAGGGTTATTCTTTCGGAATCTTCTCAGTGAAAT
VVB019D10_132198 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB019D10 5, mRNA sequence.
CB002670.1:16-35
GGATGGTTTGGATTT16TTCTGCTGCTGATGATGAGGGTTATTCTTTCGGAATCTTCTCAGTGAAAT
Petunia x hybrida cDNA, clone: PET04SEQ05703B.
DC242245.1:147-166
AAACAAGCCAAGCACTCAGTCTCAGAAGAA147TTCTGCTGCTGATGATGAGGGCATGGATCCTACGCAATACTATGAAAGAT
VVH032C01_743899 CabSau Flower Nectary Stage 25 (NECu0025) Vitis vinifera cDNA clone VVH032C01 5, mRNA sequence.
DT009037.1:356-375
CATTACGGAGATTCATGATGGTTTGGATTT356TTCTGCTGCTGATGATGAGGGTTATTCTTTCGGAATCTTCTCAGTGAAAT
VV_PEb23d02.b1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence.
EV236978.1:843-862
CATTACGGAGATTCATGATGGTTTGGATTT843TTCTGCTGCTGATGATGAGGGTTATTCTTTTGGAATCTTCTCAGTGAAAT
RS2DJ10TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EY938369.1:538-557
CAACAACGTCAAGAGTACAGAAGCCTTTGC538TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
RS3GX14TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
FD957516.1:87-106
CAACAACGTCAAGAGTACAGAAGCCTTTGC87TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Petunia axillaris subsp. axillaris EST, clone dr004P0001K24_F.ab1 2007-08-10.
FN007165.1:201-220
AAACAAGCCAAGCACTCAGTCTCAGAAGAA201TTCTGCTGCTGATGATGAGGGCATGGATCCTACGCAATACTATGAAAATA
Raphanus sativus mRNA, clone: RSCF13P16, 5' end sequence.
FY431366.1:447-466
CAACAACGTCAAGAGTACAGAAGCCTTTGC447TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Raphanus sativus mRNA, clone: RSCF20B14, 5' end sequence.
FY432914.1:495-514
CAACAACGTCAAGAGTACAGAAGCCTTTGC495TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Raphanus sativus mRNA, clone: RSCR13H11, 5' end sequence.
FY443865.1:536-555
CAACAACGTCAAGAGTACAGAAGCCTTTGC536TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Raphanus sativus mRNA, clone: RSCR16C18, 5' end sequence.
FY444699.1:488-507
CAACAACGTCAAGAGTACAGAAGCCTTTGC488TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Raphanus sativus mRNA, clone: RSCS09F01, 5' end sequence.
FY449054.1:541-560
CAACAACGTCAAGAGTACAGAAGCCTTTGC541TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Raphanus sativus mRNA, clone: RSCS15G16, 5' end sequence.
FY451230.1:61-80
CAACAACGTCAAGAGTACAGAAGCCTTTGC61TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Raphanus sativus mRNA, clone: RSCS20I08, 5' end sequence.
FY453066.1:516-535
CAACAACGTCAAGAGTACAGAAGCCTTTGC516TTCTGCTGCTGATGATGAGGATGTGGATGGTACTGTGCAAGATGTTGTTG
Zea mays cultivar B73 chromosome 2 clone CH201-319O20, *** SEQUENCING IN PROGRESS ***, 11 unordered pieces.
AC192366.4:195421-195440
TGACTTCCTCATGTCTGACTGTTCTGGCGA195421TTCTGCTGCTGATGATGAGGGTACTGCCTCTGAAATTGCTGCTGAGGCAG
Vitis vinifera, whole genome shotgun sequence, contig VV78X059139.5, clone ENTAV 115.
AM479851.1:32010-32029
TGTGCAGGAGATTCATGATGGTTTGGATTT32010TTCTGCTGCTGATGATGAGGGTTATTCTTTTGGAATCTTCTCAGTGAAAT
Arachis hypogaea cultivar Shitouqi chromosome B07.
CP030999.1:93758010-93758029
GGATGCTGCAGCTGCTGAAGTAAAGGGGGG93758010TTCTGCTGCTGATGATGAGGGCTGAGCTGCCTCCTCCACTGCTCTGGCTC
Vitis vinifera cv. PN40024, annotated scaffold_104.assembly12x.
FN596005.1:804931-804950
TGTGCAGGAGATTCATGATGGTTTGGATTT804931TTCTGCTGCTGATGATGAGGGTTATTCTTTTGGAATCTTCTCAGTGAAAT
Vitis vinifera clone SS0ABG22YD19.
FQ383348.1:912-931
CATTACGGAGATTCATGATGGTTTGGATTT912TTCTGCTGCTGATGATGAGGGTTATTCTTTTGGAATCTTCTCAGTGAAAT
Zea mays genome assembly, chromosome: 2.
LR897968.1:119387148-119387167
TGACTTCCTCATGTCTGACTGTTCTGGCGA119387148TTCTGCTGCTGATGATGAGGGTACTGCCTCTGAAATTGCTGCTGAGGCAG
Schistosoma turkestanicum genome assembly, chromosome: 5.
OX103975.1:15046154-15046173
AAAATGGGTGTTTTTTAAAATGTGATTTAT15046154TTCTGCTGCTGATGATGAGGATGATAAAAATTGTTGTGAATTAAACTTTT
Amphiduros pacificus genome assembly, chromosome: 5.
OX439004.1:27927634-27927653
ACTCTATTGCAAATATAATATTGCTGCTGC27927634TTCTGCTGCTGATGATGAGGAAGGGGAGGAGGAGGAGGAGGAGGAGGAAG
Tetanocera ferruginea genome assembly, chromosome: 3.
OY282642.1:155299532-155299551
GAAGAAAAACTATTTGCAAAACTTTGACTT155299532TTCTGCTGCTGATGATGAGGACAGAACTTTGAGTTTGAGCATCCTGGACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCATCATCAGCAGCAGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCATCATCAGCAGCAGAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.385 | 0.377 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCATCATCAGCAGCAGAA&k=0&no_gap=0&offset=0&limit=50
2.044 | 1.659 | search_minus_done; http://172.18.8.135:50400/match?q=TTCTGCTGCTGATGATGAGG&k=0&no_gap=0&offset=0&limit=18
2.062 | 0.018 | cgi_end;

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