GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 01:50:17, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Allium cepa genome assembly, chromosome: 1.
LR994629.1:155011454-155011473
AAATGATGAGAGCTAATATTTTTATTTATC155011454CCTCATGGTGTATGGGTTTGTAAGTAAAATGTGCTCCAAAAAAAAAAAAT
Athripsodes cinereus genome assembly, chromosome: 4.
OX388308.1:5796677-5796696
CTGGAGAATGCCGTTCCTACCAACAAGAAT5796677CCTCATGGTGTATGGGTTTGATTAGCTTCTAAAATATACAGGGCAACTGT
Allium cepa genome assembly, chromosome: 1.
LR994629.1:155015840-155015859
ATTTTTTTTTTTTGGAGCACATTTTACTTA155015840CAAACCCATACACCATGAGGGATAAATAAAAATATTAGCTCTCATCATTT
Rhaphigaster nebulosa genome assembly, chromosome: 4.
OX411310.1:51582595-51582614
GAAGAGGAAAAAATTAATCAATGGCAATTT51582595CAAACCCATACACCATGAGGATTTTTACTCGTGGGAACAGCATTTTCAAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTCATGGTGTATGGGTTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCATGGTGTATGGGTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCATGGTGTATGGGTTTG&k=0&no_gap=0&offset=0&limit=50
0.136 | 0.025 | search_minus_done; http://172.18.8.135:50400/match?q=CAAACCCATACACCATGAGG&k=0&no_gap=0&offset=0&limit=48
0.137 | 0.002 | cgi_end;

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