GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 22:01:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

RCLFM01TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLFM01, mRNA sequence.
EG661120.1:114-135
CTTAGAGAAGGTAAATTAAATCATTTTTAT114CCTCCATTGGTTTCTCCATTTAACACCTAATCACTTGTTAATCAAATTATTA
RCLG602TP Castor bean cDNA library from leaves, 1.7 kb Ricinus communis cDNA clone RCLG602, mRNA sequence.
EG662973.1:236-257
CTTAGAGAAGGTAAATTAAATCATTTTTAT236CCTCCATTGGTTTCTCCATTTAACACCTAATCACTTGTTAATCAAATTATTA
RCRBZ23TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBZ23, mRNA sequence.
EG667110.1:192-213
CTTAGAGAAGGTAAATTAAATCATTTTTAT192CCTCCATTGGTTTCTCCATTTAACACCTAATCACTTGTTAATCAAATTATTA
RCRD192TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRD192, mRNA sequence.
EG673813.1:191-212
CTTAGAGAAGGTAAATTAAATCATTTTTAT191CCTCCATTGGTTTCTCCATTTAACACCTAATCACTTGTTAATCAAATTATTA
RCRDF26TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRDF26, mRNA sequence.
EG676210.1:227-248
CTTAGAGAAGGTAAATTAAATCATTTTTAT227CCTCCATTGGTTTCTCCATTTAACACCTAATCACTTGTTAATCAAATTATTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTCCATTGGTTTCTCCATTTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCCATTGGTTTCTCCATTTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.338 | 0.329 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCCATTGGTTTCTCCATTTA&k=0&no_gap=0&offset=0&limit=50
0.369 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=TAAATGGAGAAACCAATGGAGG&k=0&no_gap=0&offset=0&limit=45
0.369 | 0.000 | cgi_end;

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