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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-11 20:33:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

USDA-FP_121000-355 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-37_B03 5', mRNA sequence.
CF505860.1:118-137
TCAGCCTCCACCACGGCCACAACGACCTCT118CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS03_05C21_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05C21, mRNA sequence.
CF837762.1:402-421
TCAGCCTCCACCACGGCCACAACGACCTCT402CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS03_05P17_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa05P17, mRNA sequence.
CF838240.1:269-288
TCAGCCTCCACCACGGCCACAACGACCTCT269CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
CGF1004552_B09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IF_B09 5', mRNA sequence.
CK935738.1:422-441
TCAGCCTCCACCACGGCCACAACGACCTCT422CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS04_0004D02_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0004D02, mRNA sequence.
CN183569.1:427-446
TCAGCCTCCACCACGGCCACAACGACCTCT427CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS04_0005E13_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0005E13, mRNA sequence.
CN184291.1:280-299
TCAGCCTCCACCACGGCCACAACGACCTCT280CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS04_2_011C07_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T3_C07, mRNA sequence.
CV884896.1:389-408
TCAGCCTCCACCACGGCCACAACGACCTCT389CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS04_2_011D08_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_011_T7_D08, mRNA sequence.
CV884923.1:382-401
TCAGCCTCCACCACGGCCACAACGACCTCT382CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS07_21A01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-21A01-B1-1-4.g, mRNA sequence.
CX045134.1:400-419
TCAGCCTCCACCACGGCCACAACGACCTCT400CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS09_17A05_b Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-17A05-A10-1-5.b, mRNA sequence.
CX047868.1:388-407
TCAGCCTCCACCACGGCCACAACGACCTCT388CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS09_25E07_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-25E07-I14-1-5.g, mRNA sequence.
CX049093.1:382-401
TCAGCCTCCACCACGGCCACAACGACCTCT382CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS09_33A04_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-33A04-A8-1-4.g, mRNA sequence.
CX050528.1:382-401
TCAGCCTCCACCACGGCCACAACGACCTCT382CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS08_22A12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-22A12-A24-1-4.g, mRNA sequence.
CX071500.1:398-417
TCAGCCTCCACCACGGCCACAACGACCTCT398CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS08_24G04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-24G04-N8-1-4.g, mRNA sequence.
CX071897.1:389-408
TCAGCCTCCACCACGGCCACAACGACCTCT389CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
UCRCS10_9E03_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9E03-I5-5.g, mRNA sequence.
CX674920.1:406-425
TCAGCCTCCACCACGGCCACAACGACCTCT406CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
Volcani_2_11_H10 Volcani02 Citrus reticulata x Citrus temple cDNA, mRNA sequence.
DN799480.1:74-93
TCAGCCTCCACCACGGCCACAACGACCTCT74CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
KN0AAP13YK21FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY260812.1:398-417
TCAGCCTCCACCACGGCCACAACGACCTCT398CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA12BC03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263628.1:401-420
TCAGCCTCCACCACGGCCACAACGACCTCT401CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA12BG03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263675.1:181-200
TCAGCCTCCACCACGGCCACAACGACCTCT181CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA17BF08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY265471.1:394-413
TCAGCCTCCACCACGGCCACAACGACCTCT394CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA20CD08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY267124.1:394-413
TCAGCCTCCACCACGGCCACAACGACCTCT394CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA24BG08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY268527.1:394-413
TCAGCCTCCACCACGGCCACAACGACCTCT394CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA30AC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY272039.1:404-423
TCAGCCTCCACCACGGCCACAACGACCTCT404CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA35AG08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY273890.1:410-429
TCAGCCTCCACCACGGCCACAACGACCTCT410CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA40CE12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276249.1:401-420
TCAGCCTCCACCACGGCCACAACGACCTCT401CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA42DH04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY277107.1:423-442
TCAGCCTCCACCACGGCCACAACGACCTCT423CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA4CC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY279847.1:394-413
TCAGCCTCCACCACGGCCACAACGACCTCT394CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA5AA10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY283610.1:404-423
TCAGCCTCCACCACGGCCACAACGACCTCT404CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA62CD10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY284876.1:383-402
TCAGCCTCCACCACGGCCACAACGACCTCT383CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA86CA03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY294784.1:404-423
TCAGCCTCCACCACGGCCACAACGACCTCT404CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA88CB11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY295535.1:396-415
TCAGCCTCCACCACGGCCACAACGACCTCT396CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA89DH02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY296060.1:394-413
TCAGCCTCCACCACGGCCACAACGACCTCT394CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA92BE05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY297303.1:394-413
TCAGCCTCCACCACGGCCACAACGACCTCT394CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA99AG03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY299722.1:389-408
TCAGCCTCCACCACGGCCACAACGACCTCT389CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
KN0AAQ3YE10RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302552.1:404-423
TCAGCCTCCACCACGGCCACAACGACCTCT404CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
KN0AAQ4YB15RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY302839.1:404-423
TCAGCCTCCACCACGGCCACAACGACCTCT404CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
KN0AAQ6YD05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY303576.1:402-421
TCAGCCTCCACCACGGCCACAACGACCTCT402CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
CS00-C2-003-071-E08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
EY692436.1:111-130
TCAGCCTCCACCACGGCCACAACGACCTCT111CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCTGATGTGCC
CS00-C3-700-049-H07-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY696659.1:407-426
TCAGCCTCCACCACGGCCACAACGACCTCT407CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
CR05-C1-100-089-H11-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY764929.1:428-447
TCAGCCTCCACCACGGCCACAACGACCTCT428CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
CR05-C3-700-062-A05-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY785111.1:413-432
TCAGCCTCCACCACGGCCACAACGACCTCT413CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
CR05-C3-700-081-B07-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY787026.1:407-426
TCAGCCTCCACCACGGCCACAACGACCTCT407CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
CR05-C3-700-142-D09-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY792430.1:416-435
TCAGCCTCCACCACGGCCACAACGACCTCT416CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
CR05-C3-701-032-H05-CT.F Mandarin fruit, development stadium (2 of 3) Citrus reticulata cDNA, mRNA sequence.
EY795598.1:399-418
TCAGCCTCCACCACGGCCACAACGACCTCT399CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA62CD10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA62CD10, mRNA sequence.
FC881456.1:383-402
TCAGCCTCCACCACGGCCACAACGACCTCT383CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA12BC03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12BC03, mRNA sequence.
FC881470.1:401-420
TCAGCCTCCACCACGGCCACAACGACCTCT401CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA17BF08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA17BF08, mRNA sequence.
FC882574.1:394-413
TCAGCCTCCACCACGGCCACAACGACCTCT394CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA12BG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12BG03, mRNA sequence.
FC883684.1:181-200
TCAGCCTCCACCACGGCCACAACGACCTCT181CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
IC0AAA42DH04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42DH04, mRNA sequence.
FC884025.1:423-442
TCAGCCTCCACCACGGCCACAACGACCTCT423CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
KN0AAQ4YB15RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ4YB15, mRNA sequence.
FC887318.1:404-423
TCAGCCTCCACCACGGCCACAACGACCTCT404CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC
Citrus jambhiri RlemTLP mRNA for thaumatin-like protein, complete cds.
AB467316.1:382-401
TCAGCCTCCACCACGGCCACAACGACCTCT382CCTCCTACGGCGTCTCTCTAGTCGACGGCTTCAACGTCCCCATGACTGTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCCTACGGCGTCTCTCTA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCCTACGGCGTCTCTCTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.833 | 2.824 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCCTACGGCGTCTCTCTA&k=0&no_gap=0&offset=0&limit=50
2.953 | 0.120 | search_minus_done; http://172.18.8.135:50400/match?q=TAGAGAGACGCCGTAGGAGG&k=0&no_gap=0&offset=0&limit=0
2.953 | 0.000 | cgi_end;

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