GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 20:45:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium subterraneum genome assembly, chromosome: 8.
OX637468.1:2066687-2066706
TGTTGATTATCAATTGTTGTATATTTTCCT2066687CCTCCTTGCATCATCTTTTCTTCTTCTTCAGATCACAGATCTATATCTTC
Hibiscus tridactylites genome assembly, chromosome: 3.
OY288267.1:45911433-45911452
TTCATCACAATTGCAAGATATGCCTGACAA45911433CCTCCTTGCATCATCTTTTCTGCTTGCGTAGCCGAGACGAAGTTAGACAA
Hibiscus tridactylites genome assembly, chromosome: 7.
OY288271.1:46368174-46368193
TTCATCACAATTGCAAGATATGCCTGACAA46368174CCTCCTTGCATCATCTTTTCTGCTTGCGTAGCCGAGACAAAGTTAGACAA
Trifolium pratense DNA, clone:RC0811r.ab1.
DE246109.1:286-305
ATCGAAGATTTAGATCTGTGATCTGAAAGA286GAAAAGATGATGCAAGGAGGAGGAAAATACACTACGATTGATAATCAACA
Medicago arabica genome assembly, chromosome: 6.
OX326969.1:59367088-59367107
AGAGATAGATCTGAAGAAGAAGAAAAAGAA59367088GAAAAGATGATGCAAGGAGGAGGAAAATATACAACTATCGATAGTCAACA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTCCTTGCATCATCTTTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCCTTGCATCATCTTTTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.104 | 0.095 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCCTTGCATCATCTTTTC&k=0&no_gap=0&offset=0&limit=50
0.157 | 0.053 | search_minus_done; http://172.18.8.135:50400/match?q=GAAAAGATGATGCAAGGAGG&k=0&no_gap=0&offset=0&limit=47
0.158 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).