GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 15:23:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Daucus carota subsp. sativus cultivar DH1 chromosome 8.
CP093350.1:22470331-22470350
TTTGTAGTAGTTCCGGATGTTGGACTTGAA22470331CCTCGGGACATAAACCTCGTCGTTCTCAAGTGATTGAGTGTTGGCGTGGT
Daucus carota subsp. sativus cultivar DH1 chromosome 8.
CP093350.1:22755061-22755080
TTTGTAGTAATTCCTGATGTTGGACTTGAA22755061CCTCGGGACATAAACCTCGTCGTTCTCAAGAGATTGAGTGTTGGCGTGGT
Daucus carota isolate Kuroda chromosome 8.
CP125308.1:34672223-34672242
TTTGTAGTAATTCCTGATGTTGGACTTGAA34672223CCTCGGGACATAAACCTCGTCGTTCTCAAGTGATTGAGTGTTGGCGTGGT
Daucus carota isolate Kuroda chromosome 8.
CP125308.1:35068849-35068868
TTTGTAGTAATTCCTGATGTTGGACTTGAA35068849CCTCGGGACATAAACCTCGTCGTTCTCAAGAGATTGAGTGTTTGCGTGGT
Daucus carota delta12-fatty acid acetylenase gene, partial cds.
AY166774.1:353-372
ACCACGCCAACACTCAATCCCTTGAGAACG353ACGAGGTTTATGTCCCGAGGTTCAAGTCCAACATCAGGAATTACTACAAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTCGGGACATAAACCTCGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCGGGACATAAACCTCGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCGGGACATAAACCTCGT&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=ACGAGGTTTATGTCCCGAGG&k=0&no_gap=0&offset=0&limit=46
0.112 | 0.001 | cgi_end;

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