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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 20:26:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Taurulus bubalis genome assembly, chromosome: 7.
OU342717.1:4113740-4113759
CCTCCCTCTCTCTCTCTCTCTCTCTCCCTC4113740CCTCTCTCTCTTCTTTACCGTCTCCTCCTGTTGGAGATAAATTAACGGAA
Zeus faber genome assembly, chromosome: 6.
OY482850.1:28550292-28550311
GCTCTCTCTCTCTCTCTCTCTCTCTCTCCC28550292CCTCTCTCTCTTCTTTACCGCCCCTCCCCCCATCTCTTTACTTTCTCTCT
Zeus faber genome assembly, chromosome: 6.
OY482850.1:28550387-28550406
TCTCTCTCTCTCTCTCTCTCTCTCTCTCCC28550387CCTCTCTCTCTTCTTTACCGCCCCTCCCCCCATCTCTTTACTTTCTCTCT
CP47_H06_048.f1 Citrus paradisi young grapefruit leaf cDNA library Citrus x paradisi cDNA clone CP47_H06_048 3', mRNA sequence.
EB687366.1:441-460
GCAAGGTCCTTTGTGCGGCTGCCCATTGTG441CCTCTCTCTCTTCTTTACCGTAGTCTTTCTTGGTAGTGAAGGCAGTCTTG
2070 Valencia sweet orange callus library Citrus sinensis cDNA clone CS_2943 5', mRNA sequence.
HS087875.1:434-453
GCAAGGTCCTTTGTGCGGCTGCCCATTGTG434CCTCTCTCTCTTCTTTACCGTAGTCTTTCTTGGTAGTGAAGGCAGTCTTG
Camelina sativa cultivar CO46 chromosome 2.
CP131550.1:796119-796138
TTTTTTTTTTTCTTCTGCTTCGTTCGCCTT796119CCTCTCTCTCTTCTTTACCGAACTCTGGTTCTAGAGAGAGAAAAAACCAT
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:29658903-29658922
GCAAGGTCCTTTGTGCGGCTGCCCATTGTG29658903CCTCTCTCTCTTCTTTACCGTAGTCTTTCTTGGTAGTGAAGGCAGTCTAT
Macrobrachium nipponense isolate FS-2020 chromosome 18.
CP062022.1:39720923-39720942
TTTTGAGAGAACAGAGAGAGATAAACACAC39720923CCTCTCTCTCTTCTTTACCGAGATGAAAGAATTTTTAGTGGTACTAGTAT
Sciaenops ocellatus chromosome 17.
CP136882.1:2100965-2100984
TTCCGTTAATTTATCTCCAACAGGAGGAGA2100965CGGTAAAGAAGAGAGAGAGGGGGAGAGAGCGAGAGAGAGAGAGAGAGAGA
Sparus aurata genome assembly, chromosome: 9.
LR537129.1:22117147-22117166
GACGTAAAACCCAACACGACTAAAAATAAA22117147CGGTAAAGAAGAGAGAGAGGGGCAGACAGACATTATTGACTGGCTAGATT
Argyrosomus regius genome assembly, chromosome: 7.
OX336888.1:922268-922287
TTCCGTTAATTTATCTCCAACAGGAGGAGA922268CGGTAAAGAAGAGAGAGAGGGGGAGAGAGAGGGAGAGAGAGCGAGGGAGA
C02023C09SK IF1 Citrus clementina cDNA clone C02023C09, mRNA sequence.
CX290352.1:464-483
CAAGACTGCCTTCACTACCAAGAAAGACTA464CGGTAAAGAAGAGAGAGAGGCACAATGGGCAGCCGCACAAAGGACCTTGC
C08030B08SK PhyRootSw1 Citrus sinensis cDNA clone C08030B08, mRNA sequence.
CX303339.1:116-135
CAAGACTGCCTTCACTACCAAGAAAGACTA116CGGTAAAGAAGAGAGAGAGGCACAATGGGCAGCCGCACAAAGGACCTTGC
IC0AAA8DG03RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY296410.1:762-781
CAAGACTGCCTTCACTACCAAGAAAGACTA762CGGTAAAGAAGAGAGAGAGGCACAATGGGCAGCCGCACAAAGGACCTTGC
CR05-C1-100-073-G03-CT.F Mandarin leaf, greenhouse plant Citrus reticulata cDNA, mRNA sequence.
EY763879.1:524-543
CAAGACTGCCTTCACTACCAAGAAAGACTA524CGGTAAAGAAGAGAGAGAGGCACAATGGGCAGCCGCACAAAGGACCTTGC
C31002D06EF AbioticL1 Citrus clementina cDNA clone C31002D06, mRNA sequence.
FC868595.1:595-614
CAAGACTGCCTTCACTACCAAGAAAGACTA595CGGTAAAGAAGAGAGAGAGGCACAATGGGCAGCCGCACAAAGGACCTTGC
C31605A02EF HSVdMacro1 Citrus macrophylla cDNA clone C31605A02, mRNA sequence.
FC877692.1:421-440
CAAGACTGCCTTCACTACCAAGAAAGACTA421CGGTAAAGAAGAGAGAGAGGCACAATGGGCGGCCGCACAAAGGACCTTGC
IC0AAA8DG03RM1 IVIA1 Citrus clementina cDNA clone IC0AAA8DG03, mRNA sequence.
FC886585.1:762-781
CAAGACTGCCTTCACTACCAAGAAAGACTA762CGGTAAAGAAGAGAGAGAGGCACAATGGGCAGCCGCACAAAGGACCTTGC
C32010F03EF RVDevelop1 Citrus clementina cDNA clone C32010F03, mRNA sequence.
FC920603.1:553-572
CAAGACTGCCTTCACTACCAAGAAAGACTA553CGGTAAAGAAGAGAGAGAGGCACAATGGGTAGCCGCACAAAGAACCTTGC
C34209H02EF PostHarveN Citrus clementina cDNA clone C34209H02, mRNA sequence.
FC932554.1:590-609
CAAGACTGCCTTCACTACCAAGAAAGACTA590CGGTAAAGAAGAGAGAGAGGCACAATGGGCAGCCGCACAAAGGACCTTAC
3152 Cleome spinosa normalized leaf ESTs ES1018 Tarenaya spinosa cDNA, mRNA sequence.
GR935022.1:96-115
CAAGACCGCTTTCACGACGAAGAAAGATTA96CGGTAAAGAAGAGAGAGAGGCTCAATGGGCGCTGGCGCAAAGGACATTGC
Microchrysa polita genome assembly, chromosome: 1.
OX454415.1:52972134-52972153
CATAAACGCACCATGCACCACTAGGAGTTA52972134CGGTAAAGAAGAGAGAGAGGACCAAGTTAACAGGGTGTCCCTTAATAGCT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCTCTCTCTTCTTTACCG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCTCTCTCTTCTTTACCG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.477 | 0.468 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCTCTCTCTTCTTTACCG&k=0&no_gap=0&offset=0&limit=50
1.184 | 0.707 | search_minus_done; http://172.18.8.135:50400/match?q=CGGTAAAGAAGAGAGAGAGG&k=0&no_gap=0&offset=0&limit=42
1.193 | 0.009 | cgi_end;

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