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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:22:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sciurus carolinensis genome assembly, chromosome: 14.
LR738604.1:79968806-79968827
ATTAAATAATTAAGAGAAAAAGTAGTAACT79968806CCTCTCTTTCTCTCTCTGCAACCCCCCTTCTCTCTCTCTAAAGAGTTGAATT
Sylvilagus floridanus genome assembly, chromosome: 3.
OX463225.1:73604426-73604447
GTGGATGGAAGCTCTCTCGCTCTCTCTCTC73604426CCTCTCTTTCTCTCTCTGCAACTTTTTCAAATAAATAAATCTTTAAGAACAA
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 14.
CP133515.1:11072471-11072492
TGCTCTTTCTCTCTCTTTCCTATCCCTATC11072471CCTCTCTTTCTCTCTCTGCAACCTTCTGCCTGAGACAGGAAGCTCAGCAAAG
Gadus macrocephalus isolate Gmac_GOA_2020 chromosome 14.
CP133538.1:11288690-11288711
TGCTCTTTCTCTCTCTTTCCTATCCCTATC11288690CCTCTCTTTCTCTCTCTGCAACCTTCTGCCTGAGACAGGAAGCTCAGCAAAG
Falco punctatus genome assembly, chromosome: 4.
OY723436.1:70397412-70397433
TGAGTCGACCATATGATACAGTTCAGGGAA70397412CCTCTCTTTCTCTCTCTGCAACTTGCAATGCAATTTGCAGATTCCAGTTGTG
E011860-024-003-L19-SP6 MPIZ-ADIS-024-inflorescence Beta vulgaris cDNA clone 024-003-L19 5-PRIME, mRNA sequence.
BQ584240.1:17-38
CACATACTCATCTTCT17CCTCTCTTTCTCTCTCTGCAACATACAAACCTCACTAAACTCTTTCTCTCTC
Saururus chinensis isolate CL-2023b chromosome 11.
CP141150.1:7037253-7037274
GTAAATGTGCCCCCCCTCCCCCCCTCTCCC7037253CCTCTCTTTCTCTCTCTGCAACTACAACTAAATATACTGAACACTATTTTGC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX590751.1:313376409-313376430
CCAAGCTTGCGCAGCCACGAATGCAGCTCT313376409CCTCTCTTTCTCTCTCTGCAACAGAAGGTTCGGGCAGTCCAATACCACGTCC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 4H.
OX638745.1:313390968-313390989
CCAAGCTTGCGCAGCCACGAATGCAGCTCT313390968CCTCTCTTTCTCTCTCTGCAACAGAAGGTTCGGGCAGTCCAATACCACGTCC
Dryas octopetala genome assembly, chromosome: 6.
OY992837.1:20767228-20767249
TCTTCCTTTCTCTTTCTCTTTCCCTCTCTC20767228CCTCTCTTTCTCTCTCTGCAACTCTCTTTCTCTCTGTACTAGTGCGGTACCA
Lathyrus sativus genome assembly, chromosome: 2.
OZ012736.1:35721637-35721658
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCC35721637CCTCTCTTTCTCTCTCTGCAACTGTTCATCATCTTCTTCCTTTTGTGCATTA
Cydia splendana genome assembly, chromosome: 3.
OU342874.1:10950485-10950506
TCTGTCCGCCTTGTCCCTGTCTTGCCTCGC10950485CCTCTCTTTCTCTCTCTGCAACTTGTCGGCTCTGTCCCGGTCACTGGATGGT
Octopus vulgaris genome assembly, chromosome: 4.
OX597817.1:36729128-36729149
GATATTTATACACCACTCTCTCTCTCTCTC36729128CCTCTCTTTCTCTCTCTGCAACAGTATACACACACATAAACATAATAATAAT
Sciurus vulgaris genome assembly, chromosome: 15.
LR738626.1:8811075-8811096
ATTTAACTCTTTAGAGAGAGAGAAGGGGGG8811075GTTGCAGAGAGAGAAAGAGAGGAGTTACTACTTTTCCTCTTAATTATTTAAT
Sylvilagus floridanus genome assembly, chromosome: 3.
OX463225.1:122396647-122396668
TAAGATTTATTTATTTACTTGAAAGGCAGA122396647GTTGCAGAGAGAGAAAGAGAGGTCTTCTATCCAATGGTTCACTCCCCAATTG
Sylvilagus floridanus genome assembly, chromosome: 8.
OX463230.1:29261835-29261856
ATCAATTTATTTATTTATTTGAAAGGCAGA29261835GTTGCAGAGAGAGAAAGAGAGGTCTTCAATCCACTGGTTCACTCCCCAGATG
Sylvilagus floridanus genome assembly, chromosome: 9.
OX463231.1:66097057-66097078
AAAGATTTATTTATTTATTTGAAAGGTAGA66097057GTTGCAGAGAGAGAAAGAGAGGTCTTCCTTTGGCTGGTTCACTCCCCAGGTG
Osmerus eperlanus genome assembly, chromosome: 13.
OY830026.1:602970-602991
GGGCAGATGCTGAGGAGACCAGAGTGATGG602970GTTGCAGAGAGAGAAAGAGAGGCTAGAAAAGGCTGGGAAGATGGAGGAAGAA
Ananas comosus genome assembly, chromosome: 17.
LR828297.1:2074384-2074405
GCGGATCCCGACAGGTAGATCGGACGGCGG2074384GTTGCAGAGAGAGAAAGAGAGGGGAACAGCACGGAAGGGAAAAAAAAACGCC
Ananas comosus var. bracteatus genome assembly, chromosome: 7.
LR862135.1:23683420-23683441
GCGGATCCCGACAGGTAGATCGGACGGCGG23683420GTTGCAGAGAGAGAAAGAGAGGGGAACAGCACGGAAGGGAAAAAAAAACGCC
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 9.
OX392555.1:42794187-42794208
GAGAGAGAAAGAGTTTAGTGAGGTTTGTAT42794187GTTGCAGAGAGAGAAAGAGAGGAGAAGATGAGTATGTGAGTGAAATTGGGGT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 9.
OX392564.1:46505760-46505781
GAGAGAGAAAGAGTTTAGTGAGGTTTGTAT46505760GTTGCAGAGAGAGAAAGAGAGGAGAAGATGAGTATGTGAGTGAAATTGGGGT
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460027.1:654932985-654933006
ACAGCGAGGAGTTACGGGCCAGGAAGAGGA654932985GTTGCAGAGAGAGAAAGAGAGGAATGGGCCGCCAGGGGGAGAAAGCCCACCT
Ilex aquifolium genome assembly, chromosome: 10.
OX637400.1:643463-643484
TTCAAATCTGTGCTTCGGTGCTCCAACTTC643463GTTGCAGAGAGAGAAAGAGAGGATGGAAAAAAAAAAAAAAGGAACGAAGACT
Carposina sasakii isolate BJYQ chromosome 20.
CP053167.1:9344390-9344411
GATGGATAAGCCTATCGGGTATGAGAGGAC9344390GTTGCAGAGAGAGAAAGAGAGGAATCCTCAATTTTATGACGCGTAAATTGTT
Cordylochernes scorpioides isolate IN4F17 chromosome 06.
CP092868.1:91973968-91973989
CCACCTAAAGACGAATATGGTACTTTGTCA91973968GTTGCAGAGAGAGAAAGAGAGGCTTTACATACATTTAAATACACATGTGAAT
Bombus hortorum genome assembly, chromosome: 2.
HG995189.1:13026661-13026682
AAACCCCCGGCTAAGCGTGGAAAGGTATGG13026661GTTGCAGAGAGAGAAAGAGAGGACCCGCCACGTCTATCGCCAACACACGTAT
Bombus pascuorum genome assembly, chromosome: 1.
HG995268.1:26511430-26511451
AAACCCCCGGCTAAGCGTGGAAAGGTATGG26511430GTTGCAGAGAGAGAAAGAGAGGACCCGCCACGTCTATCGCCAACACACGTAT
Cydia amplana genome assembly, chromosome: 3.
OX419657.1:11453293-11453314
ACCATCCAGTGACCGGGACAGGGCCGACAA11453293GTTGCAGAGAGAGAAAGAGAGGGCGAGGCAAAACAGGGACAGAGCGGACAGA
Anisus vortex genome assembly, chromosome: 8.
OX421499.1:2903578-2903599
TGAAAGCGTAATGCTATAATATAGGCCTAT2903578GTTGCAGAGAGAGAAAGAGAGGGAGAGGGGGGGGGGTCAGAAAGGGAGACAA
Cydia fagiglandana genome assembly, chromosome: 8.
OY750798.1:10905075-10905096
ACCATCCAGTGACCGGGACAGAGCTGACAA10905075GTTGCAGAGAGAGAAAGAGAGGGCGAGGCAAGACAGGGACAAGGCGGACAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCTCTTTCTCTCTCTGCAAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCTCTTTCTCTCTCTGCAAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.229 | 0.220 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCTCTTTCTCTCTCTGCAAC&k=0&no_gap=0&offset=0&limit=50
0.377 | 0.148 | search_minus_done; http://172.18.8.135:50400/match?q=GTTGCAGAGAGAGAAAGAGAGG&k=0&no_gap=0&offset=0&limit=37
0.389 | 0.011 | cgi_end;

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