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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-12-18 21:34:19, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Canis lupus genome assembly, chromosome: 21.
HG994405.1:49451453-49451473
TCTAGAACCCCAATTATATGTAGATTTTTC49451453CCTCTGTTTCTTTGCTCTTTGGACACATTTTATCTATCTATCTGTCATCTA
Sarcophilus harrisii genome assembly, chromosome: 5.
LR735558.1:96843000-96843020
CAGTTTCCTATCCTGTTACCTGTCCCACTC96843000CCTCTGTTTCTTTGCTCTTTGGCCTGGCACTGGCAGTTTACCTAAAATTTA
OL5448F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5448, mRNA sequence.
EH422324.1:313-333
CAGCATCACCACTAGTCCTGCTTGTCCCTG313CCTCTGTTTCTTTGCTCTTTGCCTTCTGTTCAATCTCTTCCTCTTCTTTTT
0109867 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV104555.1:299-319
CAGCATCACCACTACTCTTGCTTGTCCCTG299CCTCTGTTTCTTTGCTCTTTGCCTTCAGTTCAATCTCTTCCTCTTCTTTTT
0110862 Brassica napus Senescent leaves Brassica napus cDNA, mRNA sequence.
EV105550.1:298-318
CAGCATCACCACTACTCTTGCTTGTCCCTG298CCTCTGTTTCTTTGCTCTTTGCCTTCTGTTCAATCTCTTCCTCTTCTTTTT
Brassica rapa subsp. pekinensis mRNA, clone:BBRAF13J08, 3'-end sequence.
FY072810.1:283-303
TAGCATCACCACTACTCTTGCTTGTCCCTG283CCTCTGTTTCTTTGCTCTTTGCCTTCTGTTCAATCTCTTCCTCTTCTTTTT
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_25476.
FX738173.1:284-304
TAGCATCACCACTACTCTTGCTTGTCCCTG284CCTCTGTTTCTTTGCTCTTTGCCTTCTGTTCAATCTCTTCCTCTTCTTTTT
ode81c09.g1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BH935461.1:574-594
CAGCATCACCACTAGTCCTGCTTGTCCCTG574CCTCTGTTTCTTTGCTCTTTGCCTGAGAAACAAAAACTCCATTAACATGAC
lkf93h11.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ074651.1:213-233
CAGCATCACCACTAGTCCTGCTTGTCCCTG213CCTCTGTTTCTTTGCTCTTTGCCTGAGAAACAAAAACTCCATTAACATGAC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH001J06, complete sequence.
AC189534.2:97614-97634
TAGCATCACCACTACTCTTGCTTGTCCCTG97614CCTCTGTTTCTTTGCTCTTTGCCTGAGAAATAAAATTTTAGATTACGTTTA
Brassica napus cultivar Xiang5A chromosome 8.
CP123883.1:36126621-36126641
CAGCATCACCACTACTCTTGCTTGTCCCTG36126621CCTCTGTTTCTTTGCTCTTTGCCTGAGAAATAAAATTTTAGATTACGTTTA
Brassica napus cultivar Xiang5A chromosome 19.
CP123894.1:60909122-60909142
CAGCATCACCACTAGTCCTGCTTGTCCCTG60909122CCTCTGTTTCTTTGCTCTTTGCCTGAGAAACAAAAACTCCATTAACATGAC
Geranium rotundifolium genome assembly, chromosome: 7.
OY987317.1:22481876-22481896
AAAAACAAGACCTAACATGTCCTATTTTCT22481876CCTCTGTTTCTTTGCTCTTTGTTTGTTATTAAACCCTTGTTCGTCCCAAAT
Othius punctulatus genome assembly, chromosome: 4.
OX638141.1:92008045-92008065
AGTTTGTAGCTGTTTTTTTTTTGTTATCTT92008045CCTCTGTTTCTTTGCTCTTTGGGTCTTTTACTCCTATGTTGATTTCCATTT
Axinella polypoides genome assembly, chromosome: 2.
OZ178452.1:4731580-4731600
CAGTGTCACTTCAAACTCTTGCAACAAAAA4731580CCTCTGTTTCTTTGCTCTTTGCGTTCTGCTTGCAGCTAGCTAGCTTGGTGC
Axinella polypoides genome assembly, chromosome: 21.
OZ178471.1:3580220-3580240
CAGTGTCACTTCAAACTCTTGCAACAAAAA3580220CCTCTGTTTCTTTGCTCTTTGCGTTCTGCTTGCAGCTAGCTAGCTTGGTGC
Microcaecilia unicolor genome assembly, chromosome: 9.
LR594640.1:185740553-185740573
AGGCCCCTGGTGTGTGTTTTTTCCCCGGCT185740553CCTCTGTTTCTTTGCTCTTTGGATTCCCTCTCTGGTTGTCTTCAAGCATGT
Myripristis murdjan genome assembly, chromosome: 24.
LR597573.1:12540306-12540326
TGAGTTTCACCTGATTGGACATTATAGGTT12540306CCTCTGTTTCTTTGCTCTTTGTTTGGTCATTTTGTTGAATTTGCTTCTGTT
Muscardinus avellanarius genome assembly, chromosome: 1.
OY726557.1:157694022-157694042
GTTTGAAATCTGTGTTTAATGTATTCTTGC157694022CAAAGAGCAAAGAAACAGAGGAAGCCAGGGCACGATTGGAAGGTGGTTTGG
Canis lupus familiaris breed Labrador retriever chromosome 21a.
CP050601.1:2254679-2254699
TAGATGACAGATAGATAGATAAAATGTGTC2254679CAAAGAGCAAAGAAACAGAGGGAAAAATCTACATATAATTGGGGTTCTAGA
Canis lupus familiaris breed Labrador retriever chromosome 21b.
CP050624.1:2251254-2251274
TAGATGACAGATAGATAGATAAAATGTGTC2251254CAAAGAGCAAAGAAACAGAGGGAAAAATCTACATATAATTGGGGTTCTAGA
Brassica oleracea var. viridis mRNA, clone: KALE-030N19, 3' end sequence.
DK526963.1:472-492
AAAAAGAAGAGGAAGAGATTGAACAGAAGG472CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
Brassica oleracea var. viridis mRNA, clone: KALE-135M08, 3' end sequence.
DK567032.1:423-443
AAAAAGAAGAGGAAGAGATTGAACAGAAGG423CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
OL5448R Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL5448, mRNA sequence.
EH422325.1:404-424
AAAAAGAAGAGGAAGAGATTGAACAGAAGG404CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
BNSCS1CT_UP_048_A04_25MAR2007_032 Brassica napus BNSCS1CT Brassica napus cDNA 5', mRNA sequence.
EV014027.1:515-535
AAAAAGAAGAGGAAGAGATTGAACAGAAGG515CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAAGAGTAGTGGTGATGCTG
BNSCS2CT_UP_277_G06_04MAY2007_036 Brassica napus BNSCS2CT Brassica napus cDNA 5', mRNA sequence.
EV035983.1:151-171
AAAAAGAAGAGGAAGAGATTGAACAGAAGG151CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAAGAGTAGTGGTGATGCTG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_15863.
FX700533.1:1188-1208
AAAAAGAAGAGGAAGAGATTGAACAGAAGG1188CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAAGAGTAGTGGTGATGCTA
Brassica napus cultivar Xiang5A chromosome 7.
CP151902.1:303233-303253
TAAACGTAATCTAAAATTTTATTTCTCAGG303233CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAAGAGTAGTGGTGATGCTG
Brassica napus cultivar Xiang5A chromosome 17.
CP151912.1:897939-897959
GTCATGTTAATGGAGTTTTTGTTTCTCAGG897939CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
Brassica napus genome assembly, chromosome: A07.
HG994361.1:248937-248957
TAAACGTAATCTAAAATTTTATTTCTCAGG248937CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAAGAGTAGTGGTGATGCTG
Brassica napus genome assembly, chromosome: C07.
HG994371.1:840438-840458
GTCATGTTAATGGAGTTTTTGTTTCTCAGG840438CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
Brassica rapa genome, scaffold: A07.
LR031574.1:293292-293312
GTCATATTAATGGAGTTTTTGTTTCTCAGG293292CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
Brassica oleracea HDEM genome, scaffold: C7.
LR031876.1:3099026-3099046
GTCATGTTAATGGAGTTTTTGTTTCTCAGG3099026CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
Brassica rapa genome assembly, chromosome: A07.
LS974623.2:295189-295209
GTCATATTAATGGAGTTTTTGTTTCTCAGG295189CAAAGAGCAAAGAAACAGAGGCAGGGACAAGCAGGACTAGTGGTGATGCTG
Endotricha flammealis genome assembly, chromosome: 14.
LR990866.1:9704842-9704862
TATATTACGTACGGTTTTCAGGCGATACGT9704842CAAAGAGCAAAGAAACAGAGGAAAGCCAAGAAAACTTCATCAGCAATCTGT
Tethea ocularis genome assembly, chromosome: 16.
OY741972.1:9688626-9688646
AGACTATTTTCCATTTATCAGGCGATACGT9688626CAAAGAGCAAAGAAACAGAGGATCGCAAAGAAGACATCTGCCATCGGTTCG
Axinella polypoides genome assembly, chromosome: 14.
OZ178464.1:3154901-3154921
GCACCAAGCTAGCTAGCTGCAAGCAGAACG3154901CAAAGAGCAAAGAAACAGAGGTTTTTGTTGCAAGAGTTTGAAGTGACACTG
Lissotriton vulgaris genome assembly, chromosome: 11.
OZ183363.1:383330391-383330411
ATATATAGTTCACCAAAGCCCTGGTGATAC383330391CAAAGAGCAAAGAAACAGAGGCATACCACGTTAGAGTCTTATCCTGTTCCA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCTGTTTCTTTGCTCTTTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCTGTTTCTTTGCTCTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.589 | 0.580 | search_plus_done; http://172.18.8.135:50800/match?q=CCTCTGTTTCTTTGCTCTTTG&k=0&no_gap=0&offset=0&limit=50
0.982 | 0.393 | search_minus_done; http://172.18.8.135:50800/match?q=CAAAGAGCAAAGAAACAGAGG&k=0&no_gap=0&offset=0&limit=32
0.995 | 0.013 | cgi_end;

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