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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 16:13:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Cervus elaphus genome assembly, chromosome: 23.
OU343100.1:58827279-58827298
TTCTTCTGGAAGCACTTGCTCCTCCATAAA58827279CCTCTTGCTCTGTTTCTGGGGAACCCGACCTGAAATAGTTCCTCATACTT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 11.
OX459947.2:56923479-56923498
TTCTTCTGGAAGCGCTTGCTTCTCCATAAA56923479CCTCTTGCTCTGTTTCTGGGGAACCTGACCTGAAATAGTTCCTCATACTT
Muntiacus reevesi genome assembly, chromosome: 2.
OZ005625.1:57578652-57578671
TTCTTCTGGAAGCACTTGCTCCTCCATAAA57578652CCTCTTGCTCTGTTTCTGGGGAACCTAACCTGAAATAGTTCCTCATACTT
Glycine max cultivar Williams 82 chromosome 7.
CP126432.1:1417636-1417655
GTACACCGGGTGCTTGCTGCAGTCCCTGGG1417636CCTCTTGCTCTGTTTCTGGGCCTGGGCCCTTGGGCCCGAATGTGAGGAGG
Glycine max cultivar Williams 82 chromosome 8.
CP126433.1:16537502-16537521
GTACACCGGGTGCTTGCTGCAGTCCCTGGG16537502CCTCTTGCTCTGTTTCTGGGCCTGGGCCTTTGGGCCCGAATGCTGCGAGG
Ceriagrion tenellum genome assembly, chromosome: 3.
OY720634.1:157335213-157335232
TGTGTCATTAAAAATACCACAGCATTAGCA157335213CCTCTTGCTCTGTTTCTGGGCGTTCTCTGTTTTCAGTTTAGGTGTTGAAT
Rangifer tarandus platyrhyncus genome assembly, chromosome: 8.
OX596092.1:24068579-24068598
AAGTATGAGGAACTATTTCAGGTCAGGTTC24068579CCCAGAAACAGAGCAAGAGGTTTATGGAGAAGCAAGCGCTTCCAGAAGAA
Sequence 45 from Patent WO2011023571.
JA169932.1:56-75
CCTCCTCACATTCGGGCCCAAGGGCCCAGG56CCCAGAAACAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTAC
Sequence 47 from Patent WO2011023571.
JA169934.1:182-201
CCTCGCAGCATTCGGGCCCAAAGGCCCAGG182CCCAGAAACAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTAC
Sequence 1411 from patent US 10750711.
MV606522.1:56-75
CCTCCTCACATTCGGGCCCAAGGGCCCAGG56CCCAGAAACAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTAC
Sequence 1411 from patent US 11819027.
OT844558.1:56-75
CCTCCTCACATTCGGGCCCAAGGGCCCAGG56CCCAGAAACAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTAC
so36e06.y1 Gm-c1039 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1039-59 5' similar to TR:Q39127 Q39127 TINY MRNA, mRNA sequence.
BE209844.1:190-209
CCTCGCAGCATTCGGGCCCAAAGGCCCAGG190CCCAGAAACAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTAC
JGI_ACBU4670.fwd ACBU Phakopsora pachyrhizi infected soybean leaf tissue 6-8 days post inoculation with TW72-1 urediniospores Glycine max cDNA clone ACBU4670 5', mRNA sequence.
EH261425.1:181-200
CCTCGCAGCATTCGGGCCCAAAGGCCCAGG181CCCAGAAACAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTAC
Glycine max clone HN_CCL_165 AP2-EREBP transcription factor (Glyma08g21650.1) mRNA, partial cds.
KT031081.1:182-201
CCTCGCAGCATTCGGGCCCAAAGGCCCAGG182CCCAGAAACAGAGCAAGAGGCCCAGGGACTGCAGCAAGCACCCGGTGTAC
Urtica urens genome assembly, chromosome: 8.
OY282527.1:21728375-21728394
TTTACCTTTCATCCATAAATAAGATTAGAG21728375CCCAGAAACAGAGCAAGAGGACCATAAACATTAAGTTGACAATTGACGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTCTTGCTCTGTTTCTGGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCTTGCTCTGTTTCTGGG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.294 | 0.285 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCTTGCTCTGTTTCTGGG&k=0&no_gap=0&offset=0&limit=50
0.665 | 0.372 | search_minus_done; http://172.18.8.135:50400/match?q=CCCAGAAACAGAGCAAGAGG&k=0&no_gap=0&offset=0&limit=44
0.671 | 0.006 | cgi_end;

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