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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 20:12:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Sequence 9925 from patent US 7960612.
GY267972.1:7-29
TTGGAA7CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Sequence 16222 from patent US 8030546.
GY468447.1:7-29
TTGGAA7CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Sequence 16222 from patent US 10597667.
MO979600.1:7-29
TTGGAA7CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH033_07682m, 5' end sequence.
AB450713.1:8-30
ATTGGAA8CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTAAGGTTAAGAA
Pyrus pyrifolia mRNA, cultivar: Housui, clone: NFR1_14_82m, 5'-end sequence.
AB529444.1:8-30
ATTGGAA8CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTAAGGTTAAGAA
TSA: Pyrus pyrifolia mRNA, contig: contig_17667.
FX434071.1:79-101
CATTTCAGAGTTTCTGGGTGTAGATTGGAA79CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTAAGGTTAAGAA
TSA: Pyrus x bretschneideri Unigene18933_XinShao mRNA sequence.
JR613544.1:138-160
CATTTCAGAGTTTCTGGGTGTAGATTGGAA138CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTAAGGTTAAGAA
Malus domestica mRNA for MADS box protein MdMADS8.
AJ001681.1:7-29
TTGGAA7CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus hybrid cultivar cultivar Royalty chromosome 17.
CP141986.1:5251635-5251657
CATTTCAGAGTTTCTGGGTGTAGATTGGAA5251635CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143374.1:5236681-5236703
CATTTCAGAGTTTCTGGGTGTAGATTGGAA5236681CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus hybrid cultivar cultivar SH6 chromosome 17.
CP143391.1:4902489-4902511
CATTTCAGAGTTTCTGGATGTAGATTGGAA4902489CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus sylvestris genome assembly, chromosome: 17.
OU696519.1:5220218-5220240
CATTTCAGAGTTTCTGGGTGTAGATTGGAA5220218CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus domestica genome assembly, chromosome: 17.
OU696693.1:5239814-5239836
CATTTCAGAGTTTCTGGGTGTAGATTGGAA5239814CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus domestica genome assembly, chromosome: 17.
OU744558.1:5533100-5533122
CATTTCAGAGTTTCTGGGTGTAGATTGGAA5533100CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus domestica genome assembly, chromosome: 17.
OU744969.1:5142975-5142997
CATTTCAGAGTTTCTGGGTGTAGATTGGAA5142975CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus domestica genome assembly, chromosome: 17.
OU745007.1:5658908-5658930
CATTTCAGAGTTTCTGGGTGTAGATTGGAA5658908CCTGAGGTTATTGACCCAAAAGAAAAATCAGGATTGGAACCTGAGGTTAAGAA
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141926.1:29246950-29246972
TTCTTAACCTCAGGTTCCAATCCTGATTTT29246950TCTTTTGGGTCAATAACCTCAGGTTCCAATCTACACCCAGAAACTCCGAAATG
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141943.1:29519106-29519128
TTCTTAACCTCAGGTTCCAATCCTGATTTT29519106TCTTTTGGGTCAATAACCTCAGGTTCCAATCTACACCCAGAAACTCTGAAATG
Malus x robusta genome assembly, chromosome: 11.
OY720335.1:29023077-29023099
TTCTTAACCTCAGGTTCCAATCCTGATTTT29023077TCTTTTGGGTCAATAACCTCAGGTTCCAATCTACACCCAGAAACTCCGAAATG
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:22715847-22715869
TTCTTAACCTCAGGTTCCAATCCTGATTTT22715847TCTTTTGGGTCAATAACCTCAGGTTCCAATCTACACCCAGAAACTCTGAAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTGAGGTTATTGACCCAAAAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTGAGGTTATTGACCCAAAAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.428 | 0.419 | search_plus_done; http://172.18.8.135:50400/match?q=CCTGAGGTTATTGACCCAAAAGA&k=0&no_gap=0&offset=0&limit=50
0.529 | 0.101 | search_minus_done; http://172.18.8.135:50400/match?q=TCTTTTGGGTCAATAACCTCAGG&k=0&no_gap=0&offset=0&limit=34
0.531 | 0.003 | cgi_end;

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