GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 08:29:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 1062 from patent US 8426682.
GZ836843.1:472-498
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA472CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
Sequence 1062 from Patent WO2009083958.
HB466341.1:472-498
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA472CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
Sequence 1062 from patent US 9670501.
KH776483.1:472-498
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA472CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
Sequence 1062 from patent US 10407690.
MO362645.1:472-498
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA472CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
KS07010E07 KS07 Capsicum annuum cDNA, mRNA sequence.
BM066074.1:334-360
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA334CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
KS09018C12 KS09 Capsicum annuum cDNA, mRNA sequence.
CA514092.1:405-431
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA405CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
JH02013C09 JH-201 Capsicum annuum cDNA 5', mRNA sequence.
CO776470.1:472-498
ACAGAANGTGGAGGTGCTAACTCTGTGGCA472CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
TSA: Capsicum annuum MGMT_Contig4256, mRNA sequence.
JW054500.1:725-751
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA725CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
TSA: Capsicum annuum MGMT_Contig36821 mRNA sequence.
JW087065.1:553-579
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA553CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 10.
CP124722.1:90894111-90894137
ACAGAAGGTGGAGGTGCTAACTCTGTGGCA90894111CCTGGTTACAATAAGGGTACTGCTTTGGGTGCTGAGATTATTGGAACTTTTGTGCTT
Capsicum annuum Takanotsume DNA, chromosome 10, sequence.
AP026705.1:100966083-100966109
AAGCACAAAAGTTCCAATAATCTCAGCACC100966083CAAAGCAGTACCCTTATTGTAACCAGGTGCCACAGAGTTAGCACCTCCACCTTCTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTGGTTACAATAAGGGTACTGCTTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTGGTTACAATAAGGGTACTGCTTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.381 | 0.373 | search_plus_done; http://172.18.8.135:50400/match?q=CCTGGTTACAATAAGGGTACTGCTTTG&k=0&no_gap=0&offset=0&limit=50
0.404 | 0.023 | search_minus_done; http://172.18.8.135:50400/match?q=CAAAGCAGTACCCTTATTGTAACCAGG&k=0&no_gap=0&offset=0&limit=40
0.405 | 0.001 | cgi_end;

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