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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 16:13:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

UNVERIFIED: Actinidia arguta mitochondrion, sequence.
MH559343.1:450044-450063
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC450044CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTGCTTTATTA
UNVERIFIED: Actinidia chinensis chromosome 1, sequence.
MH645953.1:578959-578978
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC578959CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTGCTTTATTA
Rhododendron simsii mitochondrion, complete genome.
MW030508.1:230493-230512
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC230493CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTAATTTGCTTTCAAA
Arctostaphylos glauca isolate Glendora Ridge Rd-6 mitochondrion, partial genome.
MZ779111.1:465791-465810
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC465791CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTGCTTTATAA
Actinidia eriantha mitochondrion, complete genome.
MZ959063.1:579212-579231
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC579212CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTGCTTTATTA
UNVERIFIED: Sinojackia microcarpa mitochondrion sequence.
OL693656.1:377585-377604
AGCTCGGAAGCTAATTCGCGTGTCGGCAGC377585CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTAATTTGCTTTATTA
Camellia sinensis var. assamica cultivar Duntsa mitochondrion, complete genome.
OL989850.1:422146-422165
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC422146CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTATTTGCTTTATTA
Rhododendron x pulchrum mitochondrion, complete genome.
OM283814.1:168479-168498
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC168479CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTAATTTGCTTTCAAA
UNVERIFIED: Primula palinuri mitochondrion sequence.
OM971881.1:111402-111421
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC111402CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTGAATTTGCTTTATTT
Actinidia chinensis cultivar varietas deliciosa hexaploid mitochondrion, complete genome.
ON012797.1:117296-117315
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC117296CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTGCTTTATTA
Actinidia chinensis var. chinensis cultivar 4x chromosome 1 mitochondrion, complete sequence.
ON024071.1:394509-394528
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC394509CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTGCTTTATTA
Camellia nitidissima mitochondrion, complete genome.
ON645224.1:264031-264050
ACCTCGGAAGCTAATCCGCGTGTCGGCAGC264031CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTATTTGCTTTATTA
Camellia sinensis var. pubilimba mitochondrion, complete genome.
ON782577.1:865388-865407
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC865388CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTTTTTTCTTTATTA
Rhododendron delavayi voucher 20171012Rd mitochondrion, complete genome.
OQ868516.1:784379-784398
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC784379CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTAATTTGCTTTCAAA
Stewartia sinensis var. sinensis mitochondrion, complete genome.
OQ948158.1:312571-312590
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC312571CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTATTTGCTTTATTA
Diospyros kaki cultivar Taishuu mitochondrion, complete genome.
OR387071.1:168180-168199
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC168180CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTCTTTTTCCA
Primula vulgaris genome assembly, chromosome: 3.
OY987214.1:17132475-17132494
ACCTCGGAAGCTAATTCGCGTGTCGCCAGC17132475CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTAATTTGCTTTACTT
Primula vulgaris genome assembly, chromosome: 6.
OY987217.1:24355735-24355754
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC24355735CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTAATTTGCTTTATTT
Actinidia chinensis mitochondrion, complete genome.
PP035753.1:493574-493593
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC493574CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTCATTTGCTTTATTA
Camellia chekiangoleosa mitochondrion, complete genome.
PP190481.1:55441-55460
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC55441CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTATTTGCTTTATTA
Camellia granthamiana mitochondrion, complete genome.
PP203036.1:230299-230318
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC230299CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTATTTGCTTTATTA
Camellia sinensis var. sinensis cultivar DaHongPao mitochondrion, complete genome.
PP212895.1:997616-997635
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC997616CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTATTTGCTTTATTA
Camellia sinensis cultivar Rougui mitochondrion, complete genome.
PP212896.1:277721-277740
ACCTCGGAAGCTAATTCGCGTGTCGGCAGC277721CCTGTCTGTCGTACCGTTGACTCTATCTATTCATTTTATTTGCTTTATTA
Coregonus sp. 'balchen' genome assembly, chromosome: 36.
LR778288.1:1182290-1182309
CTGTCAGAGGACAGAGTGAGACGGTCAGAG1182290TCAACGGTACGACAGACAGGCAGCGTGCTCTGGGATCTAGACACAGTGTG
010526KAEB002156HT (KAEB) Actinidia deliciosa dormant buds before hydrogen cyanamide treatment Actinidia deliciosa cDNA clone KAEBB00215, mRNA sequence.
FG447836.1:461-480
TAATAAAGCAAATGAAATGAATAGATAGAG461TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
010513KAFB001249HT (KAFB) Actinidia deliciosa buds 3 days after hydrogen cyanamide treatment Actinidia deliciosa cDNA clone KAFBB00124, mRNA sequence.
FG448149.1:462-481
TAATAAAGCAAATGAAATGAATAGATAGAG462TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar TTES_No. 13 NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845293.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Chin Shin Dah Pan NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845294.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia furfuracea cultivar Chyh Ya Sun Cha NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845295.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia tenuifolia cultivar Don San NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845296.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Bair Mau Hour NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845297.1:720-739
TAATAAAGCAAATAAAATGAATAGATAGAG720TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Chin Shin Oolong NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845298.1:720-739
TAATAAAGCAAATAAAATGAATAGATAGAG720TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis var. assamica cultivar Shan NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845299.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Shiang Yuan NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845300.1:720-739
TAATAAAGCAAATAAAATGAATAGATAGAG720TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis var. assamica cultivar Burma NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845301.1:720-739
TAATAAAGCAAATAAAATGAATAGATAGAG720TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Shy Jin Chuen NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845302.1:720-739
TAATAAAGCAAATAAAATGAATAGATAGAG720TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Gau Lu NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845303.1:720-739
TAATAAAGCAAATAAAATGAATAGATAGAG720TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Tiee Guan In NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845304.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar Taiwan Sun Cha NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845305.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis cultivar TTES No. 12 NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845306.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis var. assamica cultivar TTES No. 18 NADH dehydrogenase subunit 7 (nad7) gene, exon 1 and partial cds; mitochondrial.
AY845307.1:725-744
TAATAAAGCAAATAAAATGAATAGATAGAG725TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Rhododendron vialii isolate Sample 1 mitochondrion, complete genome.
CP127079.1:110822-110841
TTTGAAAGCAAATTAAATGAATAGATAGAG110822TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
UNVERIFIED: Actinidia eriantha mitochondrion, sequence.
MH645952.1:338245-338264
TAATAAAGCAAATGAAATGAATAGATAGAG338245TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis var. assamica chromosome 2, complete sequence.
MK574877.1:339873-339892
TAATAAAGCAAATTAAATTAATAGATAGAG339873TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Monotropa hypopitys chromosome 1, complete sequence.
MK990822.1:307777-307796
TTCGAAAGCAAATTCAATGAATAGATAGAG307777TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTCGCTTCCGAGGT
Diospyros oleifera mitochondrion, complete genome.
MW970112.1:10844-10863
TGGAAAAAGAAATGAAATGAATAGATAGAG10844TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Actinidia chinensis chromosome 1, complete sequence.
MZ959061.1:165167-165186
TAATAAAGCAAATGAAATGAATAGATAGAG165167TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis mitochondrion, complete genome.
OM809792.1:189061-189080
TAATAAAGCAAATAAAATGAATAGATAGAG189061TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
UNVERIFIED: Primula valentiniana mitochondrion sequence.
OM971882.1:47998-48017
AAATAAAGCAAATTGAATGAATAGATAGAG47998TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
UNVERIFIED: Primula smithiana mitochondrion sequence.
OM971883.1:408381-408400
AAATAAAGCAAATTTAATGAATAGATAGAG408381TCAACGGTACGACAGACAGGGCTGCCGACGCGCGAATTAGCTTCCGAGGT
Saurauia tristyla chromosome 1 mitochondrion, complete sequence.
ON024068.1:382658-382677
TAATAAAGCAAATGAAATGAATAGATAGAG382658TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia gigantocarpa mitochondrion, partial genome.
OP270590.1:602353-602372
TAATAAAGCAAATAAAATGAATAGATAGAG602353TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Actinidia latifolia mitochondrion, complete genome.
OQ198584.1:448918-448937
TAATAAAGCAAATGAAATGAATAGATAGAG448918TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Actinidia valvata chromosome 1 mitochondrion, complete sequence.
OQ259535.1:131634-131653
TAATAAAGCAAATGAAATGAATAGATAGAG131634TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Rhododendron decorum mitochondrion, complete genome.
OQ450179.1:354599-354618
TTTGAAAGCAAATTAAATGAATAGATAGAG354599TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCCCCCTATTG
Primula sikkimensis chromosome 4 mitochondrion, complete sequence.
OR402841.1:20301-20320
AAATAAAGCAAATTAAATGAATAGATAGAG20301TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Actinidia macrosperma mitochondrion, complete genome.
OR466481.1:389747-389766
TAATAAAGCAAATGAAATGAATAGATAGAG389747TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Impatiens glandulifera genome assembly, chromosome: 9.
OU015489.1:2248096-2248115
ATAGTAATAAGAAAAAAAAAATAGATAGAG2248096TCAACGGTACGACAGACAGGGCTGCCGACACGAGAATTAGCTTACGAGGT
Primula veris genome assembly, chromosome: 5.
OY821744.1:21122218-21122237
AAATAAAGCAAATTAAATGAATAGATAGAG21122218TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Primula veris genome assembly, organelle: mitochondrion.
OY821752.1:28672-28691
AAATAAAGCAAATTAAATGAATAGATAGAG28672TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Primula vulgaris genome assembly, organelle: mitochondrion.
OY987223.1:82079-82098
AAATAAAGCAAATTAAATGAATAGATAGAG82079TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Actinidia eriantha mitochondrion, complete genome.
PP035760.1:721764-721783
TAATAAAGCAAATGAAATGAATAGATAGAG721764TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Actinidia rufa mitochondrion, complete genome.
PP212808.1:305889-305908
TAATAAAGCAAATGAAATGAATAGATAGAG305889TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT
Camellia sinensis var. sinensis cultivar DaHongPao mitochondrion, complete genome.
PP212895.1:811090-811109
TAATAAAGCAAATAAAATGAATAGATAGAG811090TCAACGGTACGACAGACAGGGCTGCCGACACGCGAATTAGCTTCCGAGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTGTCTGTCGTACCGTTGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTGTCTGTCGTACCGTTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.138 | 0.129 | search_plus_done; http://172.18.8.135:50400/match?q=CCTGTCTGTCGTACCGTTGA&k=0&no_gap=0&offset=0&limit=50
0.341 | 0.204 | search_minus_done; http://172.18.8.135:50400/match?q=TCAACGGTACGACAGACAGG&k=0&no_gap=0&offset=0&limit=27
0.368 | 0.027 | cgi_end;

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